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The map label for this gene is sufB [H]

Identifier: 169629833

GI number: 169629833

Start: 2795685

End: 2797112

Strand: Reverse

Name: sufB [H]

Synonym: MAB_2749c

Alternate gene names: 169629833

Gene position: 2797112-2795685 (Counterclockwise)

Preceding gene: 169629834

Following gene: 169629832

Centisome position: 55.2

GC content: 61.76

Gene sequence:

>1428_bases
ATGACCCTCGAACGTGAGGTCTTGACCCAGGACGAAACCATTGCGTCGCTGGGCAATTACGGCTATGGCTGGTCGGACTC
CGACGTCGCGGGGGCAAGCGCTCAGCGCGGGCTTTCCGAGGCCGTGGTCCGCGATATCTCGGGAAAGAAGAACGAACCCG
AGTGGATGCTGGACATCCGCCTGAAGGCGTTGCGTACTTTCGACAAGAAGCCCATGCCGAACTGGGGGTCCAACCTCGAT
GGCATCGATTTCGACAACATCAAGTACTTCGTGCGTTCGACGGAGAAGCAGGCGGCGTCCTGGGACGATCTGCCCGAGGA
CATCAGGAACACCTATGACCGGTTGGGTATCCCGGAGGCCGAGAAGCAGCGGCTGGTAGCCGGTGTCGCAGCCCAGTACG
AGTCCGAGGTCGTCTACCACCAGATCCGTGAGGACCTCGAATCGCAGGGTGTCATCTTTCTGGACACCGACTCGGGTCTG
CGTGAGCATCCGGAGATCTTCAAGGAGTACTTCGGCAGCGTGATCCCCGCCGGCGACAACAAGTTTTCCGCGCTCAATAC
CGCGGTGTGGTCGGGCGGCTCGTTCATCTACGTGCCGCCGGGTGTGCATGTCGACATCCCGCTGCAGGCCTACTTCCGGA
TCAACACCGAGAACATGGGCCAGTTCGAGCGGACGCTCATCATCGCCGACGAGGGTTCCTACGTGCACTACGTCGAGGGA
TGTACTGCGCCGATCTACAAGTCGGATTCGCTGCACTCGGCCGTCGTGGAGATCATCGTGAAGCCGAATGCGCGCGTCCG
GTACACGACGATCCAGAACTGGTCGAACAACGTCTACAACCTGGTGACCAAGCGCGCCCGTGCCGAGGCCGGGGCCACCA
TGGAGTGGATCGACGGCAACATCGGGTCCAAGGTCACCATGAAGTATCCGGCGGTCTGGATGACCGGTGAGCACGCCAAG
GGCGAGGTGCTTTCGGTGGCATTCGCCGGCGAGGGGCAGCATCAGGACACCGGCGCCAAGATGCTGCATCTGGCTCCGAA
GACGTCCTCCACGATCGTGTCCAAGTCGGTGGCTCGCGGCGGCGGACGTGCCTCGTACCGGGGTCTGGTGCAGGTCAACA
AGGGTGCGCACGGTTCGCACTCATCGGTGAAATGCGATGCGTTGCTTGTTGACACGATCAGCCGCAGCGACACCTACCCC
TACGTCGACATCCGCGAGGACGACGTCACGATGGGCCATGAGGCCACGGTGTCCAAGGTCAGCGAGGATCAGCTGTTCTA
CCTGATGAGCCGCGGCCTTACCGAGGATGAGGCGATGGCCATGGTGGTGCGCGGGTTCGTCGAACCCATCGCCAAGGAAT
TGCCCATGGAGTACGCGCTCGAGCTCAACCGCCTCATCGAGCTGCAAATGGAAGGCGCGGTCGGTTAA

Upstream 100 bases:

>100_bases
CTGCACCACCCATGTGCCGATGCAGACGTCACCGCCTGCCTAACAGCCCAGTCCCGGTGCCCAGCCCGCGCCGGATGTCA
AACGAGTAGAAGGAGTCACG

Downstream 100 bases:

>100_bases
CGCATGTCGAATCTCACTGATTCCACCCCGGGTGGATCGAATCTCGCTGGGGCCGTAGAGGGTACGGGCATCAACAAGGG
CGAGCTGTTCAGCTCGTACG

Product: putative FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTLEREVLTQDETIASLGNYGYGWSDSDVAGASAQRGLSEAVVRDISGKKNEPEWMLDIRLKALRTFDKKPMPNWGSNLD
GIDFDNIKYFVRSTEKQAASWDDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDSGL
REHPEIFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEG
CTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAK
GEVLSVAFAGEGQHQDTGAKMLHLAPKTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYP
YVDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG

Sequences:

>Translated_475_residues
MTLEREVLTQDETIASLGNYGYGWSDSDVAGASAQRGLSEAVVRDISGKKNEPEWMLDIRLKALRTFDKKPMPNWGSNLD
GIDFDNIKYFVRSTEKQAASWDDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDSGL
REHPEIFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEG
CTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAK
GEVLSVAFAGEGQHQDTGAKMLHLAPKTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYP
YVDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG
>Mature_474_residues
TLEREVLTQDETIASLGNYGYGWSDSDVAGASAQRGLSEAVVRDISGKKNEPEWMLDIRLKALRTFDKKPMPNWGSNLDG
IDFDNIKYFVRSTEKQAASWDDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDSGLR
EHPEIFKEYFGSVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEGC
TAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWMTGEHAKG
EVLSVAFAGEGQHQDTGAKMLHLAPKTSSTIVSKSVARGGGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYPY
VDIREDDVTMGHEATVSKVSEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=482, Percent_Identity=39.6265560165975, Blast_Score=380, Evalue=1e-107,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52660; Mature: 52529

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEREVLTQDETIASLGNYGYGWSDSDVAGASAQRGLSEAVVRDISGKKNEPEWMLDIR
CCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCEEEHHH
LKALRTFDKKPMPNWGSNLDGIDFDNIKYFVRSTEKQAASWDDLPEDIRNTYDRLGIPEA
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCCCHH
EKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDSGLREHPEIFKEYFGSVIPAGDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCEECCCCC
KFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEG
CHHHHHHHEECCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEECCCCEEEEECC
CTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGN
CCCCCCCCCCHHHHHHHEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC
IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPKTSSTIVSKSVARG
CCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCC
GGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV
CCCCCEEEEEEECCCCCCCCCCEEEEEEEEEHHCCCCCCCEEEECCCCCCCCCCHHHHHC
SEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
TLEREVLTQDETIASLGNYGYGWSDSDVAGASAQRGLSEAVVRDISGKKNEPEWMLDIR
CCCHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCEEEHHH
LKALRTFDKKPMPNWGSNLDGIDFDNIKYFVRSTEKQAASWDDLPEDIRNTYDRLGIPEA
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCCCHH
EKQRLVAGVAAQYESEVVYHQIREDLESQGVIFLDTDSGLREHPEIFKEYFGSVIPAGDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCEECCCCC
KFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSYVHYVEG
CHHHHHHHEECCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEECCCCEEEEECC
CTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWIDGN
CCCCCCCCCCHHHHHHHEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCC
IGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLAPKTSSTIVSKSVARG
CCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCC
GGRASYRGLVQVNKGAHGSHSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKV
CCCCCEEEEEEECCCCCCCCCCEEEEEEEEEHHCCCCCCCEEEECCCCCCCCCCHHHHHC
SEDQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]