| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629813
Identifier: 169629813
GI number: 169629813
Start: 2778188
End: 2778745
Strand: Reverse
Name: 169629813
Synonym: MAB_2729c
Alternate gene names: NA
Gene position: 2778745-2778188 (Counterclockwise)
Preceding gene: 169629817
Following gene: 169629812
Centisome position: 54.84
GC content: 65.23
Gene sequence:
>558_bases GTGACGCCGCAGCACCTGCCGACCTTCATTCCCGCCGAACTGTGCCAGGCGGTGGGCGTGTCGATACAGACCGCGGGAAC CGACCCCGTGGGCTGGTCGGCCAAGTGTCTGCAGATGGCGCGCGCGGACGTCAACGAGGACGGCGTCGCGGCCGCGCCGG CTGACGTTCCCGGGCTGAAGGAAGTCGTCGCCAAGGCGCATGCCAAGGACATCGACCTGAAGGTCGTCGCTCTTCCTGGC AATCCCTGGATTGACACCCCGTTGCGCGATATCGCGACCGAGATCGGCAAGGACCATCCGGACTCGACGATCCTGGTCAT CAGCCCCTCCTACGCCGGCACCTACAGCGCCAAGTACGACAGGGTGACGCTGGAGGCGGGGCAGGATGTCGCAAAGACCG GGAACCCGGTCCTGTCGGCCAACAACTTCGTGGACGAGCTGGGACGTGAGCACTTCTCATGGACCGCGTTGACCATTGTG CTCGTCGTGCTGGTCGCGGCGGCCTGCGCCGGAATTGCACTCGTTCGCGGCCGCTTCGCGAATGACTCGGTTAAGTAA
Upstream 100 bases:
>100_bases TCGTGGCATCCGCCACCCCGGGGGAAGGCGTCGTTATGCACGTCAAATACGGCGTGTCCGGGTGCGCAACGCGGCGCTCG CCGGGGGTTAGATTGGTCGC
Downstream 100 bases:
>100_bases CGGTTTGCAAACCATTCGCACACCAGGTTTCGTCGCGAAATAGCCGCGCGCACTATAGAACCCGGATGAACTGCCGCTTT TCAATTCGCGTCAATTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTPQHLPTFIPAELCQAVGVSIQTAGTDPVGWSAKCLQMARADVNEDGVAAAPADVPGLKEVVAKAHAKDIDLKVVALPG NPWIDTPLRDIATEIGKDHPDSTILVISPSYAGTYSAKYDRVTLEAGQDVAKTGNPVLSANNFVDELGREHFSWTALTIV LVVLVAAACAGIALVRGRFANDSVK
Sequences:
>Translated_185_residues MTPQHLPTFIPAELCQAVGVSIQTAGTDPVGWSAKCLQMARADVNEDGVAAAPADVPGLKEVVAKAHAKDIDLKVVALPG NPWIDTPLRDIATEIGKDHPDSTILVISPSYAGTYSAKYDRVTLEAGQDVAKTGNPVLSANNFVDELGREHFSWTALTIV LVVLVAAACAGIALVRGRFANDSVK >Mature_184_residues TPQHLPTFIPAELCQAVGVSIQTAGTDPVGWSAKCLQMARADVNEDGVAAAPADVPGLKEVVAKAHAKDIDLKVVALPGN PWIDTPLRDIATEIGKDHPDSTILVISPSYAGTYSAKYDRVTLEAGQDVAKTGNPVLSANNFVDELGREHFSWTALTIVL VVLVAAACAGIALVRGRFANDSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19440; Mature: 19309
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQHLPTFIPAELCQAVGVSIQTAGTDPVGWSAKCLQMARADVNEDGVAAAPADVPGLK CCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCCHH EVVAKAHAKDIDLKVVALPGNPWIDTPLRDIATEIGKDHPDSTILVISPSYAGTYSAKYD HHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC RVTLEAGQDVAKTGNPVLSANNFVDELGREHFSWTALTIVLVVLVAAACAGIALVRGRFA EEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NDSVK CCCCC >Mature Secondary Structure TPQHLPTFIPAELCQAVGVSIQTAGTDPVGWSAKCLQMARADVNEDGVAAAPADVPGLK CCCCCCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCCHH EVVAKAHAKDIDLKVVALPGNPWIDTPLRDIATEIGKDHPDSTILVISPSYAGTYSAKYD HHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC RVTLEAGQDVAKTGNPVLSANNFVDELGREHFSWTALTIVLVVLVAAACAGIALVRGRFA EEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NDSVK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA