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The map label for this gene is ycfF [C]

Identifier: 169629745

GI number: 169629745

Start: 2704730

End: 2705170

Strand: Direct

Name: ycfF [C]

Synonym: MAB_2660

Alternate gene names: 169629745

Gene position: 2704730-2705170 (Clockwise)

Preceding gene: 169629744

Following gene: 169629747

Centisome position: 53.38

GC content: 64.63

Gene sequence:

>441_bases
ATGGCCGACGACTGCTTGTTTTGCGGGATCATCTCCGGTGTAGTGCCCAGCGTGCGGGTCTCCGAGGACGCCGAAACGTA
CGCGTTCATGGACATCAACCCCGGATCGGACGGACATCTGCTGGTGGTTCCGAAGCGGCACAGCACGGATCTGCTCGAGA
TACCGCCGGACGACCTCAGCGCCGTTGCCTTGGCGGCGCAGCGCATCGCCAAAGCGGCAGTCGCCGAGCTCGGCGCCGAC
GGGGTGAACCTGCTGAATTGCTGTGGGGCGCACGCCTGGCAGACGGAGTTCCACTTCCATCTGCACGTGATCCCGCGGTA
CACCGACAAATCCAGGGACGGATTGCGGTTGCCGTGGATCCCGGGGGTGCGCGGCGATACGCGCACCATCGCGGCGCTGG
GAAACAGGCTGTGCGCGGCACTCGACGTCAAAGAAATGTGA

Upstream 100 bases:

>100_bases
GGGGTCTGTCTACCCCGAGGGCACCGCCGTGGTTCTGCCTATTGATCTCCGCAACGGATCGGACATGCATTCGATACGTC
AACGCCTCTAGCGTGGGACG

Downstream 100 bases:

>100_bases
CGGTCTCCGACAGCGCTGCCCGCGGCATCTCTGGGGCCTTCGTTTCTGGATTCCTGTAACCAATCGACATGCCGCAGTAC
AGGACCCGCTGCGGTGGTGG

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MADDCLFCGIISGVVPSVRVSEDAETYAFMDINPGSDGHLLVVPKRHSTDLLEIPPDDLSAVALAAQRIAKAAVAELGAD
GVNLLNCCGAHAWQTEFHFHLHVIPRYTDKSRDGLRLPWIPGVRGDTRTIAALGNRLCAALDVKEM

Sequences:

>Translated_146_residues
MADDCLFCGIISGVVPSVRVSEDAETYAFMDINPGSDGHLLVVPKRHSTDLLEIPPDDLSAVALAAQRIAKAAVAELGAD
GVNLLNCCGAHAWQTEFHFHLHVIPRYTDKSRDGLRLPWIPGVRGDTRTIAALGNRLCAALDVKEM
>Mature_145_residues
ADDCLFCGIISGVVPSVRVSEDAETYAFMDINPGSDGHLLVVPKRHSTDLLEIPPDDLSAVALAAQRIAKAAVAELGADG
VNLLNCCGAHAWQTEFHFHLHVIPRYTDKSRDGLRLPWIPGVRGDTRTIAALGNRLCAALDVKEM

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=138, Percent_Identity=36.9565217391304, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15745; Mature: 15614

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDCLFCGIISGVVPSVRVSEDAETYAFMDINPGSDGHLLVVPKRHSTDLLEIPPDDLS
CCCCHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCHH
AVALAAQRIAKAAVAELGADGVNLLNCCGAHAWQTEFHFHLHVIPRYTDKSRDGLRLPWI
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
PGVRGDTRTIAALGNRLCAALDVKEM
CCCCCCCHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
ADDCLFCGIISGVVPSVRVSEDAETYAFMDINPGSDGHLLVVPKRHSTDLLEIPPDDLS
CCCHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCEEECCCCCHH
AVALAAQRIAKAAVAELGADGVNLLNCCGAHAWQTEFHFHLHVIPRYTDKSRDGLRLPWI
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
PGVRGDTRTIAALGNRLCAALDVKEM
CCCCCCCHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]