Click here to switch to the map view.

The map label for this gene is ynfA [C]

Identifier: 169629683

GI number: 169629683

Start: 2637984

End: 2638319

Strand: Direct

Name: ynfA [C]

Synonym: MAB_2597

Alternate gene names: 169629683

Gene position: 2637984-2638319 (Clockwise)

Preceding gene: 169629681

Following gene: 169629684

Centisome position: 52.06

GC content: 64.58

Gene sequence:

>336_bases
GTGCTCGTCGCAAAGTCGATTCTTTTGTTCACCGCGGCCGCGGTCCTGGAAATCGGTGGTGCCTGGCTTGTCTGGCAGGG
GGTGCGCGAGCACCGCGGCTGGGCATGGATGGGTCTGGGTGCTATCGCCCTGGGTGCCTATGGATTTGTCGCGACCTTGC
AACCTGACGCCCATTTCGGCCGGATCCTGGCGGCTTACGGCGGGATATTTGTCGCCGGTTCGCTGCTGTGGGGAATCGCG
CTCGACGGATTCCGCCCTGACCGGTGGGACGTCATCGGTGCGCTGGTGTGCCTGGCCGGGGTGGGAGTCATCATGTACAT
GCCCCGCAGCGCATGA

Upstream 100 bases:

>100_bases
GATGCTTGCGCCGCCATCTACAACTTTCCTTCGCCCGGTGTACACAGATTCTTGAATCTGTGTACACCCCTTGTCTGGCG
CCGGCAACTAGGCTCACCAG

Downstream 100 bases:

>100_bases
GCAGCCAACAGCCCGGGGCGCTGCGGCGCGAATTGGGCACCTTCGACGCCGTCATGATCGGGTTAGGCTCGATGATCGGT
GCCGGGATCTTCGCGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLVAKSILLFTAAAVLEIGGAWLVWQGVREHRGWAWMGLGAIALGAYGFVATLQPDAHFGRILAAYGGIFVAGSLLWGIA
LDGFRPDRWDVIGALVCLAGVGVIMYMPRSA

Sequences:

>Translated_111_residues
MLVAKSILLFTAAAVLEIGGAWLVWQGVREHRGWAWMGLGAIALGAYGFVATLQPDAHFGRILAAYGGIFVAGSLLWGIA
LDGFRPDRWDVIGALVCLAGVGVIMYMPRSA
>Mature_111_residues
MLVAKSILLFTAAAVLEIGGAWLVWQGVREHRGWAWMGLGAIALGAYGFVATLQPDAHFGRILAAYGGIFVAGSLLWGIA
LDGFRPDRWDVIGALVCLAGVGVIMYMPRSA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=102, Percent_Identity=38.2352941176471, Blast_Score=59, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11788; Mature: 11788

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAKSILLFTAAAVLEIGGAWLVWQGVREHRGWAWMGLGAIALGAYGFVATLQPDAHFG
CCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCEEEEHHHHHHHHHHHHEEEECCCHHHH
RILAAYGGIFVAGSLLWGIALDGFRPDRWDVIGALVCLAGVGVIMYMPRSA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MLVAKSILLFTAAAVLEIGGAWLVWQGVREHRGWAWMGLGAIALGAYGFVATLQPDAHFG
CCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCEEEEHHHHHHHHHHHHEEEECCCHHHH
RILAAYGGIFVAGSLLWGIALDGFRPDRWDVIGALVCLAGVGVIMYMPRSA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA