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The map label for this gene is yhfM [C]

Identifier: 169629684

GI number: 169629684

Start: 2638316

End: 2639575

Strand: Direct

Name: yhfM [C]

Synonym: MAB_2598

Alternate gene names: 169629684

Gene position: 2638316-2639575 (Clockwise)

Preceding gene: 169629683

Following gene: 169629685

Centisome position: 52.07

GC content: 66.11

Gene sequence:

>1260_bases
ATGAGCAGCCAACAGCCCGGGGCGCTGCGGCGCGAATTGGGCACCTTCGACGCCGTCATGATCGGGTTAGGCTCGATGAT
CGGTGCCGGGATCTTCGCGGCCCTGGCACCCGCGGCCCGGTCTGCCGGTTCCGCCTTGCTCATCGGTCTGTGTGTCGCCG
CAGTCATCGCCTACTGCAATGCCACCTCGTCGGCCCGGCTAGCTGCGGTGTACCCCGCCTCAGGCGGCACATACGTATAC
GGGCGCGAACGTCTGGGCGACTTCTGGGGATACCTGGCCGGTTGGGGATTCGTGGTGGGCAAAACCGCGTCATGCGCGGC
GATGGCGTTGACGATCGGCTTCTACGCATGGCCCGGACATGCGCATGCCGTCGCGGTGGCATCGGTGGTGGCGCTGACGG
CGATTAACTATGTGGGAGTGCAGAAATCAGCGTGGCTGACGCGTGTCATCGTGGCGATTGTGTTGTCAGTACTGGCCGCG
ATTGTGGCTACCGCGGCGGGCTCCGGCAGCGTGGATATCGCGGCCCTCGACCTTACTGGCACGTCGTGGCGTGGAGTCCT
GCAAGCTGCGGGCCTGTTGTTCTTCGCCTTCGCTGGGTATGCCCGCATCGCAACGCTGGGCGAAGAGGTCCGCGACCCGG
CGCGCACTATCCCTCGTGCCATCCCGATCGCCCTGGGAATCGCACTGGTGGTGTATGTCGTTGTGGCATTGGCGGTCTTG
ATAACACTGGGGCCTTCGCGGCTGGCGAGCTCAGCGGCTCCCCTGCTCGATGCCGTCACCGCGGCGGGCGCTGGATGGAT
GGAGCCGGTGGTGCGGATCGGTGCCGTCGTGGCCGCCACCGGCTCGCTACTGGCGCTCATCCTCGGGGTATCACGCACCA
CCTTTGCGATGGCTCGCGACCGCCACCTGCCGCACACACTTGCCACGGTGCATCCCAAGTACGGTGTGCCATACCGCGCT
GAAATCCTTGTCGGCCTTGTTGTTTCGGTACTTGCGGCCACAGCCGACCTGCGGGGCGCGATTGGCTTCTCATCCTTTGC
GGTGCTGGTCTACTACGCGGTGGCCAACGCGTCGGCCTGGACGCTGACCCCGTCCCAAGGACGGCCTGCGCGGATCATCC
CGGCAGTCGGTCTGGTCGGGTGTGTGATCGTGTCCCTTGCGTTGCCCCTGTCCTCGGTGGCGGCCGGTACGGGGGTGCTG
GCCGTTGGCGTCATTGTCTACGCGCTGCGCCGGGTCAGTGGCCCGGGTAGGCGTGAATAA

Upstream 100 bases:

>100_bases
GAATCGCGCTCGACGGATTCCGCCCTGACCGGTGGGACGTCATCGGTGCGCTGGTGTGCCTGGCCGGGGTGGGAGTCATC
ATGTACATGCCCCGCAGCGC

Downstream 100 bases:

>100_bases
GAGCCGTATCGAGCTTTGGAACTGCGTGGGTCAGTTCATGTTCGGCGACATGGGCAATGCGGTGCGCCTCGCTGAGGCTG
ACGTCCGGATCGATGTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSSQQPGALRRELGTFDAVMIGLGSMIGAGIFAALAPAARSAGSALLIGLCVAAVIAYCNATSSARLAAVYPASGGTYVY
GRERLGDFWGYLAGWGFVVGKTASCAAMALTIGFYAWPGHAHAVAVASVVALTAINYVGVQKSAWLTRVIVAIVLSVLAA
IVATAAGSGSVDIAALDLTGTSWRGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPIALGIALVVYVVVALAVL
ITLGPSRLASSAAPLLDAVTAAGAGWMEPVVRIGAVVAATGSLLALILGVSRTTFAMARDRHLPHTLATVHPKYGVPYRA
EILVGLVVSVLAATADLRGAIGFSSFAVLVYYAVANASAWTLTPSQGRPARIIPAVGLVGCVIVSLALPLSSVAAGTGVL
AVGVIVYALRRVSGPGRRE

Sequences:

>Translated_419_residues
MSSQQPGALRRELGTFDAVMIGLGSMIGAGIFAALAPAARSAGSALLIGLCVAAVIAYCNATSSARLAAVYPASGGTYVY
GRERLGDFWGYLAGWGFVVGKTASCAAMALTIGFYAWPGHAHAVAVASVVALTAINYVGVQKSAWLTRVIVAIVLSVLAA
IVATAAGSGSVDIAALDLTGTSWRGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPIALGIALVVYVVVALAVL
ITLGPSRLASSAAPLLDAVTAAGAGWMEPVVRIGAVVAATGSLLALILGVSRTTFAMARDRHLPHTLATVHPKYGVPYRA
EILVGLVVSVLAATADLRGAIGFSSFAVLVYYAVANASAWTLTPSQGRPARIIPAVGLVGCVIVSLALPLSSVAAGTGVL
AVGVIVYALRRVSGPGRRE
>Mature_418_residues
SSQQPGALRRELGTFDAVMIGLGSMIGAGIFAALAPAARSAGSALLIGLCVAAVIAYCNATSSARLAAVYPASGGTYVYG
RERLGDFWGYLAGWGFVVGKTASCAAMALTIGFYAWPGHAHAVAVASVVALTAINYVGVQKSAWLTRVIVAIVLSVLAAI
VATAAGSGSVDIAALDLTGTSWRGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPIALGIALVVYVVVALAVLI
TLGPSRLASSAAPLLDAVTAAGAGWMEPVVRIGAVVAATGSLLALILGVSRTTFAMARDRHLPHTLATVHPKYGVPYRAE
ILVGLVVSVLAATADLRGAIGFSSFAVLVYYAVANASAWTLTPSQGRPARIIPAVGLVGCVIVSLALPLSSVAAGTGVLA
VGVIVYALRRVSGPGRRE

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=417, Percent_Identity=28.0575539568345, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI258614003, Length=404, Percent_Identity=26.4851485148515, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI258614005, Length=404, Percent_Identity=26.2376237623762, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI258645169, Length=404, Percent_Identity=26.4851485148515, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI114326544, Length=396, Percent_Identity=25.5050505050505, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI114326550, Length=396, Percent_Identity=25.5050505050505, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI181337167, Length=378, Percent_Identity=28.042328042328, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI110347453, Length=386, Percent_Identity=29.2746113989637, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI33286428, Length=397, Percent_Identity=27.2040302267003, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI186910308, Length=412, Percent_Identity=24.5145631067961, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI186910306, Length=412, Percent_Identity=24.5145631067961, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI186910304, Length=412, Percent_Identity=24.5145631067961, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI115648063, Length=451, Percent_Identity=24.8337028824834, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI115648022, Length=451, Percent_Identity=24.8337028824834, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI187423910, Length=383, Percent_Identity=24.5430809399478, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI7657591, Length=383, Percent_Identity=24.5430809399478, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI71979932, Length=432, Percent_Identity=26.6203703703704, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI7657683, Length=372, Percent_Identity=25.2688172043011, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI9790235, Length=315, Percent_Identity=25.0793650793651, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI71999149, Length=379, Percent_Identity=24.802110817942, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI33286430, Length=226, Percent_Identity=28.7610619469027, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87082250, Length=413, Percent_Identity=25.6658595641646, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1786789, Length=346, Percent_Identity=25.1445086705202, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786694, Length=326, Percent_Identity=26.0736196319018, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1786302, Length=354, Percent_Identity=24.2937853107345, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081869, Length=373, Percent_Identity=24.1286863270777, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786602, Length=337, Percent_Identity=23.1454005934718, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082023, Length=380, Percent_Identity=25.7894736842105, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI48994972, Length=337, Percent_Identity=24.3323442136499, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788480, Length=356, Percent_Identity=27.5280898876405, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081915, Length=358, Percent_Identity=24.0223463687151, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17532491, Length=387, Percent_Identity=29.1989664082687, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17531343, Length=392, Percent_Identity=25.5102040816327, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17533459, Length=388, Percent_Identity=25.7731958762887, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17540018, Length=425, Percent_Identity=25.4117647058824, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI32566699, Length=360, Percent_Identity=26.3888888888889, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17568033, Length=337, Percent_Identity=25.5192878338279, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71993915, Length=374, Percent_Identity=25.1336898395722, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24667468, Length=385, Percent_Identity=27.7922077922078, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24668806, Length=402, Percent_Identity=26.6169154228856, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21356285, Length=402, Percent_Identity=26.6169154228856, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24668802, Length=402, Percent_Identity=26.6169154228856, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24666159, Length=414, Percent_Identity=23.4299516908213, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221512776, Length=414, Percent_Identity=23.4299516908213, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221331183, Length=434, Percent_Identity=26.2672811059908, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17647653, Length=434, Percent_Identity=26.2672811059908, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24664379, Length=434, Percent_Identity=26.2672811059908, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21357367, Length=431, Percent_Identity=26.4501160092807, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI281366235, Length=392, Percent_Identity=26.2755102040816, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI116007820, Length=392, Percent_Identity=26.2755102040816, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45550968, Length=439, Percent_Identity=25.7403189066059, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI19921172, Length=439, Percent_Identity=25.7403189066059, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI116007818, Length=392, Percent_Identity=26.2755102040816, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI85725152, Length=392, Percent_Identity=26.2755102040816, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161077963, Length=400, Percent_Identity=26.5, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24651635, Length=421, Percent_Identity=24.7030878859857, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24651633, Length=421, Percent_Identity=24.7030878859857, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24641995, Length=371, Percent_Identity=23.989218328841, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24641993, Length=371, Percent_Identity=23.989218328841, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 42504; Mature: 42373

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQQPGALRRELGTFDAVMIGLGSMIGAGIFAALAPAARSAGSALLIGLCVAAVIAYCN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
ATSSARLAAVYPASGGTYVYGRERLGDFWGYLAGWGFVVGKTASCAAMALTIGFYAWPGH
CCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCC
AHAVAVASVVALTAINYVGVQKSAWLTRVIVAIVLSVLAAIVATAAGSGSVDIAALDLTG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
TSWRGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPIALGIALVVYVVVALAVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLGPSRLASSAAPLLDAVTAAGAGWMEPVVRIGAVVAATGSLLALILGVSRTTFAMARD
HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
RHLPHTLATVHPKYGVPYRAEILVGLVVSVLAATADLRGAIGFSSFAVLVYYAVANASAW
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEE
TLTPSQGRPARIIPAVGLVGCVIVSLALPLSSVAAGTGVLAVGVIVYALRRVSGPGRRE
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SSQQPGALRRELGTFDAVMIGLGSMIGAGIFAALAPAARSAGSALLIGLCVAAVIAYCN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
ATSSARLAAVYPASGGTYVYGRERLGDFWGYLAGWGFVVGKTASCAAMALTIGFYAWPGH
CCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCC
AHAVAVASVVALTAINYVGVQKSAWLTRVIVAIVLSVLAAIVATAAGSGSVDIAALDLTG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
TSWRGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPIALGIALVVYVVVALAVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLGPSRLASSAAPLLDAVTAAGAGWMEPVVRIGAVVAATGSLLALILGVSRTTFAMARD
HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
RHLPHTLATVHPKYGVPYRAEILVGLVVSVLAATADLRGAIGFSSFAVLVYYAVANASAW
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEE
TLTPSQGRPARIIPAVGLVGCVIVSLALPLSSVAAGTGVLAVGVIVYALRRVSGPGRRE
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]