| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629672
Identifier: 169629672
GI number: 169629672
Start: 2631016
End: 2631690
Strand: Direct
Name: 169629672
Synonym: MAB_2586
Alternate gene names: NA
Gene position: 2631016-2631690 (Clockwise)
Preceding gene: 169629671
Following gene: 169629673
Centisome position: 51.92
GC content: 57.48
Gene sequence:
>675_bases GTGAGGGGTTCAACAGGGACGCCTGGGCTCGAGGACGACGACAAATCGTGGGAAGTCGCCGCCGTTTTGGGTGGAGGATC GCATCCACATGTGGGCACATTCCAGTACTTCATCGACGGCCAGCGCTGGGTGTGGTCGGACACCATCGCGCGAATCCACG GCTATCAGCCAGGGCAAGTGCAGCCCACTACCGACTTGTTATTGAGCCATAAGCATCCCGACGACCGTGCCAAGGTTGCC GAAATCTTGCACCGCGTACAAGCTGGCGGGCCCTTCAGCAGCCGTCATCGCATCATCGACACTCACGGCGCCACCCACTG GGTTGTCGTGGTGGGCGACCAAATGATGGACGACAGCGGCGAGGTAGTAGGAACCGAGGGCTTTTATATTGACGTCACCG ACGGCCTGCAGTCCGACATTACGACGGAAACTTCCAGGATTCTCAAATCCCGTTCCATCATCGATCAAGCCAAGGGGGTA TTGATGGTGGCCTACGGGATCGACGATGCGCGGGCCTTCGAGGTTCTGAAGTTGAGCTCTCAGCTGGCTCAAGTCAAATT AGCCACTGTCGCAAGACAATTCCTCGATGCTATTCGGTCTCACGGGTTGCCGCCCGAGACGGTCCGGACCATCGATCGGC TGTTGGTTCAAACCCGTCAAAGCTATCAAAAATAG
Upstream 100 bases:
>100_bases ACAGACATGCGCAGAAGCCACCCCAGCCACACATTTACGGTGTAAATTAGTAGTTCAATAGGCCGTAAATGGCTGTGTCA CTTGATAAATGAGGGGTGCA
Downstream 100 bases:
>100_bases GCCGCGATGGTGACTAGTGCGCGTGCCCGCACACAGGAGATTGGCAGGTGGGGAAACTAGCCTGATCCCTCAATCCGAGA ATTGACGGGAAGCGCACGAT
Product: putative transcription antitermination regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQVQPTTDLLLSHKHPDDRAKVA EILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSGEVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGV LMVAYGIDDARAFEVLKLSSQLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK
Sequences:
>Translated_224_residues MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQVQPTTDLLLSHKHPDDRAKVA EILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSGEVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGV LMVAYGIDDARAFEVLKLSSQLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK >Mature_224_residues MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQVQPTTDLLLSHKHPDDRAKVA EILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSGEVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGV LMVAYGIDDARAFEVLKLSSQLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24726; Mature: 24726
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50921 ANTAR ; PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQV CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCEEEHHHHHHHHCCCCCCCC QPTTDLLLSHKHPDDRAKVAEILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSG CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCC EVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGVLMVAYGIDDARAFEVLKLSS CEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH QLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQV CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCEEEHHHHHHHHCCCCCCCC QPTTDLLLSHKHPDDRAKVAEILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSG CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCC EVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGVLMVAYGIDDARAFEVLKLSS CEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH QLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2447183; 11234002 [H]