Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169629672

Identifier: 169629672

GI number: 169629672

Start: 2631016

End: 2631690

Strand: Direct

Name: 169629672

Synonym: MAB_2586

Alternate gene names: NA

Gene position: 2631016-2631690 (Clockwise)

Preceding gene: 169629671

Following gene: 169629673

Centisome position: 51.92

GC content: 57.48

Gene sequence:

>675_bases
GTGAGGGGTTCAACAGGGACGCCTGGGCTCGAGGACGACGACAAATCGTGGGAAGTCGCCGCCGTTTTGGGTGGAGGATC
GCATCCACATGTGGGCACATTCCAGTACTTCATCGACGGCCAGCGCTGGGTGTGGTCGGACACCATCGCGCGAATCCACG
GCTATCAGCCAGGGCAAGTGCAGCCCACTACCGACTTGTTATTGAGCCATAAGCATCCCGACGACCGTGCCAAGGTTGCC
GAAATCTTGCACCGCGTACAAGCTGGCGGGCCCTTCAGCAGCCGTCATCGCATCATCGACACTCACGGCGCCACCCACTG
GGTTGTCGTGGTGGGCGACCAAATGATGGACGACAGCGGCGAGGTAGTAGGAACCGAGGGCTTTTATATTGACGTCACCG
ACGGCCTGCAGTCCGACATTACGACGGAAACTTCCAGGATTCTCAAATCCCGTTCCATCATCGATCAAGCCAAGGGGGTA
TTGATGGTGGCCTACGGGATCGACGATGCGCGGGCCTTCGAGGTTCTGAAGTTGAGCTCTCAGCTGGCTCAAGTCAAATT
AGCCACTGTCGCAAGACAATTCCTCGATGCTATTCGGTCTCACGGGTTGCCGCCCGAGACGGTCCGGACCATCGATCGGC
TGTTGGTTCAAACCCGTCAAAGCTATCAAAAATAG

Upstream 100 bases:

>100_bases
ACAGACATGCGCAGAAGCCACCCCAGCCACACATTTACGGTGTAAATTAGTAGTTCAATAGGCCGTAAATGGCTGTGTCA
CTTGATAAATGAGGGGTGCA

Downstream 100 bases:

>100_bases
GCCGCGATGGTGACTAGTGCGCGTGCCCGCACACAGGAGATTGGCAGGTGGGGAAACTAGCCTGATCCCTCAATCCGAGA
ATTGACGGGAAGCGCACGAT

Product: putative transcription antitermination regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQVQPTTDLLLSHKHPDDRAKVA
EILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSGEVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGV
LMVAYGIDDARAFEVLKLSSQLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK

Sequences:

>Translated_224_residues
MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQVQPTTDLLLSHKHPDDRAKVA
EILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSGEVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGV
LMVAYGIDDARAFEVLKLSSQLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK
>Mature_224_residues
MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQVQPTTDLLLSHKHPDDRAKVA
EILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSGEVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGV
LMVAYGIDDARAFEVLKLSSQLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24726; Mature: 24726

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50921 ANTAR ; PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQV
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCEEEHHHHHHHHCCCCCCCC
QPTTDLLLSHKHPDDRAKVAEILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSG
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCC
EVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGVLMVAYGIDDARAFEVLKLSS
CEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH
QLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGSTGTPGLEDDDKSWEVAAVLGGGSHPHVGTFQYFIDGQRWVWSDTIARIHGYQPGQV
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCEEEHHHHHHHHCCCCCCCC
QPTTDLLLSHKHPDDRAKVAEILHRVQAGGPFSSRHRIIDTHGATHWVVVVGDQMMDDSG
CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCC
EVVGTEGFYIDVTDGLQSDITTETSRILKSRSIIDQAKGVLMVAYGIDDARAFEVLKLSS
CEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH
QLAQVKLATVARQFLDAIRSHGLPPETVRTIDRLLVQTRQSYQK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2447183; 11234002 [H]