| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629673
Identifier: 169629673
GI number: 169629673
Start: 2631789
End: 2632754
Strand: Direct
Name: 169629673
Synonym: MAB_2587
Alternate gene names: NA
Gene position: 2631789-2632754 (Clockwise)
Preceding gene: 169629672
Following gene: 169629674
Centisome position: 51.94
GC content: 63.25
Gene sequence:
>966_bases ATGACGTTCAGCTCGCCGACAGAGCCACTTGCCTGGGCGACAGCGTGGCGTGCATGGCATTTCGATATGGCAGCCACGGT ATGCGCAGTCCTGCTCGTGGCCGGATACGCCTGGCCGCTGTCCCGTGCCCGCCGACACCGATCCGACACCAGCGCGGGCT GGGTGAGTTGTTTCGTCATCGGTATTGGATGCTGGGTCCTGGCGAGCATGAGCTTTGTCGGTGTCTATGCACACACGCTG TTTTGGATCCGGGCCTTGCAGGTTGTACTGCTGCTACTGGTCGCGCCATTCTTCCTCACACTTGGCCGGCCGATGACGAT CACGCGGAATGCACTGCCGCAGTGGGCGCTGGACGGGTTGAGCCGCGCGGTACCGTCAACGCTGGCGAGGACTATGACCC ACCCGCTGACAACATCCCTGGCGATGTTGGCCACGCCCTGGTTGCTATATCTGACGCCGTGGTACACAGCGTCACTCACC AATGGTGCGCTTGGCGCCGCGACGCGAATCATGTTGGTGTTGATCGGGTTTTCCTATTTCTATGCGCGGCTACAAGTGGA CCCGGTGCCCCGACGGTACCCGCAGCTGATATCGCTGTTGATCAGTGTCGCCGAGACCATCGGTGACGGGGTGCTCGGTT TGGTGCTTTGGCAAGGCCCGCTGGTGGCGTCTACCTACTACCTCGCGCTACACCGCTCCTGGGGACCGGATCTGCGGACC GATCAGACGATCGGCGCCGGCATTCTCTGGATTCTCGGCGACGTCCTTGGGCTGCCGTTCCTGGTGCTGCTCATGCGCGC ATTGTCCGCGGACGACAGGGCACACGCTGCACAGATTGATGCCGAACTCGACCGGGTGGGCCAATCCCCGTCCGCAACGG CCACCGCGCCCGCCCAGGATCTGGCCACATCCACGCTATGGTGGGAGAACGACCCGCAGCTGCGTGACCGGTTCGGACGG CACTGA
Upstream 100 bases:
>100_bases AGGCCGCGATGGTGACTAGTGCGCGTGCCCGCACACAGGAGATTGGCAGGTGGGGAAACTAGCCTGATCCCTCAATCCGA GAATTGACGGGAAGCGCACG
Downstream 100 bases:
>100_bases GATTGTTGGGCTTCCTACCCCTTCCACTGGGACGTAACCCGGACTTCTGTACAGTACGTCTATTTTTCGGGCAGTATGTA CAGATGGACGTCCCTCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTFSSPTEPLAWATAWRAWHFDMAATVCAVLLVAGYAWPLSRARRHRSDTSAGWVSCFVIGIGCWVLASMSFVGVYAHTL FWIRALQVVLLLLVAPFFLTLGRPMTITRNALPQWALDGLSRAVPSTLARTMTHPLTTSLAMLATPWLLYLTPWYTASLT NGALGAATRIMLVLIGFSYFYARLQVDPVPRRYPQLISLLISVAETIGDGVLGLVLWQGPLVASTYYLALHRSWGPDLRT DQTIGAGILWILGDVLGLPFLVLLMRALSADDRAHAAQIDAELDRVGQSPSATATAPAQDLATSTLWWENDPQLRDRFGR H
Sequences:
>Translated_321_residues MTFSSPTEPLAWATAWRAWHFDMAATVCAVLLVAGYAWPLSRARRHRSDTSAGWVSCFVIGIGCWVLASMSFVGVYAHTL FWIRALQVVLLLLVAPFFLTLGRPMTITRNALPQWALDGLSRAVPSTLARTMTHPLTTSLAMLATPWLLYLTPWYTASLT NGALGAATRIMLVLIGFSYFYARLQVDPVPRRYPQLISLLISVAETIGDGVLGLVLWQGPLVASTYYLALHRSWGPDLRT DQTIGAGILWILGDVLGLPFLVLLMRALSADDRAHAAQIDAELDRVGQSPSATATAPAQDLATSTLWWENDPQLRDRFGR H >Mature_320_residues TFSSPTEPLAWATAWRAWHFDMAATVCAVLLVAGYAWPLSRARRHRSDTSAGWVSCFVIGIGCWVLASMSFVGVYAHTLF WIRALQVVLLLLVAPFFLTLGRPMTITRNALPQWALDGLSRAVPSTLARTMTHPLTTSLAMLATPWLLYLTPWYTASLTN GALGAATRIMLVLIGFSYFYARLQVDPVPRRYPQLISLLISVAETIGDGVLGLVLWQGPLVASTYYLALHRSWGPDLRTD QTIGAGILWILGDVLGLPFLVLLMRALSADDRAHAAQIDAELDRVGQSPSATATAPAQDLATSTLWWENDPQLRDRFGRH
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1998 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 - InterPro: IPR019108 [H]
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 35347; Mature: 35215
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSSPTEPLAWATAWRAWHFDMAATVCAVLLVAGYAWPLSRARRHRSDTSAGWVSCFVI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GIGCWVLASMSFVGVYAHTLFWIRALQVVLLLLVAPFFLTLGRPMTITRNALPQWALDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHH SRAVPSTLARTMTHPLTTSLAMLATPWLLYLTPWYTASLTNGALGAATRIMLVLIGFSYF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHH YARLQVDPVPRRYPQLISLLISVAETIGDGVLGLVLWQGPLVASTYYLALHRSWGPDLRT HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC DQTIGAGILWILGDVLGLPFLVLLMRALSADDRAHAAQIDAELDRVGQSPSATATAPAQD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH LATSTLWWENDPQLRDRFGRH HHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure TFSSPTEPLAWATAWRAWHFDMAATVCAVLLVAGYAWPLSRARRHRSDTSAGWVSCFVI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GIGCWVLASMSFVGVYAHTLFWIRALQVVLLLLVAPFFLTLGRPMTITRNALPQWALDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHH SRAVPSTLARTMTHPLTTSLAMLATPWLLYLTPWYTASLTNGALGAATRIMLVLIGFSYF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHH YARLQVDPVPRRYPQLISLLISVAETIGDGVLGLVLWQGPLVASTYYLALHRSWGPDLRT HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC DQTIGAGILWILGDVLGLPFLVLLMRALSADDRAHAAQIDAELDRVGQSPSATATAPAQD CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH LATSTLWWENDPQLRDRFGRH HHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]