| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629486
Identifier: 169629486
GI number: 169629486
Start: 2457047
End: 2457379
Strand: Direct
Name: 169629486
Synonym: MAB_2400
Alternate gene names: NA
Gene position: 2457047-2457379 (Clockwise)
Preceding gene: 169629485
Following gene: 169629487
Centisome position: 48.49
GC content: 60.96
Gene sequence:
>333_bases ATGATCGGCATAGTCGCGCTGGCGATCGGCGTGGTACTGGGGTTGGTGTTTCACCCGAACGTGCCTGATGCTGTCGCCCC GTACTTGCCGATCGCAGTGGTAGCGGCGCTCGACGCACTCTTCGGCGGCGCGCGGGCCTACCTGGACCAGATATTCGATT CGAAGGTCTTTGTGGTCTCCTTCGTATTCAACGTCCTGGTGGCGGCACTGATCGTTTTCGTGGGTGACCAGCTCGGAGTC GGCACCCAGCTATCGACAGCCATCATCGTCGTTCTCGGCATCCGAATCTTCGGTAATGCTGCCGCCCTGCGGCGCAGGTT GTTTGGGGCGTGA
Upstream 100 bases:
>100_bases GATGGCCCCGGCGGCCAGTCGGGATGTCAAATACGCCAAAGAGATTCCGGCGGGCAACCGGTGAGGTGGACCCGACCGTG ATGTGGAGAGGAAGTGGACG
Downstream 100 bases:
>100_bases GCCAGTGAACCAATCCCATCCTGGACAGCCCGACCCGCGGCTCGAATCGCACCCCGGCAAACACGAGATGCCCAAGACGC GCCGGCCACCGACGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MIGIVALAIGVVLGLVFHPNVPDAVAPYLPIAVVAALDALFGGARAYLDQIFDSKVFVVSFVFNVLVAALIVFVGDQLGV GTQLSTAIIVVLGIRIFGNAAALRRRLFGA
Sequences:
>Translated_110_residues MIGIVALAIGVVLGLVFHPNVPDAVAPYLPIAVVAALDALFGGARAYLDQIFDSKVFVVSFVFNVLVAALIVFVGDQLGV GTQLSTAIIVVLGIRIFGNAAALRRRLFGA >Mature_110_residues MIGIVALAIGVVLGLVFHPNVPDAVAPYLPIAVVAALDALFGGARAYLDQIFDSKVFVVSFVFNVLVAALIVFVGDQLGV GTQLSTAIIVVLGIRIFGNAAALRRRLFGA
Specific function: Unknown
COG id: COG3856
COG function: function code S; Uncharacterized conserved protein (small basic protein)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sbp family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009709 [H]
Pfam domain/function: PF06947 DUF1290 [H]
EC number: NA
Molecular weight: Translated: 11436; Mature: 11436
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIVALAIGVVLGLVFHPNVPDAVAPYLPIAVVAALDALFGGARAYLDQIFDSKVFVVS CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FVFNVLVAALIVFVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MIGIVALAIGVVLGLVFHPNVPDAVAPYLPIAVVAALDALFGGARAYLDQIFDSKVFVVS CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FVFNVLVAALIVFVGDQLGVGTQLSTAIIVVLGIRIFGNAAALRRRLFGA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]