| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629487
Identifier: 169629487
GI number: 169629487
Start: 2457342
End: 2458163
Strand: Direct
Name: 169629487
Synonym: MAB_2401
Alternate gene names: NA
Gene position: 2457342-2458163 (Clockwise)
Preceding gene: 169629486
Following gene: 169629488
Centisome position: 48.5
GC content: 66.67
Gene sequence:
>822_bases ATGCTGCCGCCCTGCGGCGCAGGTTGTTTGGGGCGTGAGCCAGTGAACCAATCCCATCCTGGACAGCCCGACCCGCGGCT CGAATCGCACCCCGGCAAACACGAGATGCCCAAGACGCGCCGGCCACCGACGCGCAGCCAGATCACTTTCGGAGTACTGG GTGTGGCCCTGTGCGCGCTCCTCGGCCTGGCGATCACCACCCAGGTGCGTCAAACCGAATCGGGCGACGGCCTGGACACC GCGCGGCCGGCCGACCTGCTCGTCCTCCTCGACTCGTTGCAGCAACGCGAGGCCAATCTCAACAAAGAGATCGCAGACCT GCAGCAAAGCCTAATCACCATGCGCGCCAGCGGAACCGGCAATCAGGCCGTGATCAACGATGCCAAGGCGCGGCTGTCGG CGCTGTCGATCATGGTGGGGACCGTGGGCGCGACCGGGCCCGGCGTCATCCTCACCATCAACGACCCCGGGCAGGGACTC GGTCCCGAGGCGCTGCTCGACATCGTCAACGAGCTGCGGGCGGCGGGAGCCGAGGCCATCGAGATCACGGCCGGCGACAA GTCGGTACGTATCGGGGTCGATTCGTGGATCATCGGCGCCCCCGGACAGCTGGTCGTGGACGGCACCACCCTGACACCCC CGTATTCGGTTCTGGCGATAGGTGATCCGCCGACACTCGCGGCGGCGATGAACATACCGGGCGGTGCCGTCGACACCGTC TCGCGGGTCGGCGGCAGCGTTACGATCGATCAGCCGGCGCGTGTAGACATCACCACCTTGCGAGAACCGAAACCTCGCCA ATACGCTCAGCCCGGCAAGTAG
Upstream 100 bases:
>100_bases CTGGTGGCGGCACTGATCGTTTTCGTGGGTGACCAGCTCGGAGTCGGCACCCAGCTATCGACAGCCATCATCGTCGTTCT CGGCATCCGAATCTTCGGTA
Downstream 100 bases:
>100_bases CCCTGTGAGCCCAGCGGCTACACCGACCACTGACCGAGAGCAAGGACGACTCACCGTGACCGAAATTCCCGCCGATCTGC ACTACACCGAGGAACACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLPPCGAGCLGREPVNQSHPGQPDPRLESHPGKHEMPKTRRPPTRSQITFGVLGVALCALLGLAITTQVRQTESGDGLDT ARPADLLVLLDSLQQREANLNKEIADLQQSLITMRASGTGNQAVINDAKARLSALSIMVGTVGATGPGVILTINDPGQGL GPEALLDIVNELRAAGAEAIEITAGDKSVRIGVDSWIIGAPGQLVVDGTTLTPPYSVLAIGDPPTLAAAMNIPGGAVDTV SRVGGSVTIDQPARVDITTLREPKPRQYAQPGK
Sequences:
>Translated_273_residues MLPPCGAGCLGREPVNQSHPGQPDPRLESHPGKHEMPKTRRPPTRSQITFGVLGVALCALLGLAITTQVRQTESGDGLDT ARPADLLVLLDSLQQREANLNKEIADLQQSLITMRASGTGNQAVINDAKARLSALSIMVGTVGATGPGVILTINDPGQGL GPEALLDIVNELRAAGAEAIEITAGDKSVRIGVDSWIIGAPGQLVVDGTTLTPPYSVLAIGDPPTLAAAMNIPGGAVDTV SRVGGSVTIDQPARVDITTLREPKPRQYAQPGK >Mature_273_residues MLPPCGAGCLGREPVNQSHPGQPDPRLESHPGKHEMPKTRRPPTRSQITFGVLGVALCALLGLAITTQVRQTESGDGLDT ARPADLLVLLDSLQQREANLNKEIADLQQSLITMRASGTGNQAVINDAKARLSALSIMVGTVGATGPGVILTINDPGQGL GPEALLDIVNELRAAGAEAIEITAGDKSVRIGVDSWIIGAPGQLVVDGTTLTPPYSVLAIGDPPTLAAAMNIPGGAVDTV SRVGGSVTIDQPARVDITTLREPKPRQYAQPGK
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 28281; Mature: 28281
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPCGAGCLGREPVNQSHPGQPDPRLESHPGKHEMPKTRRPPTRSQITFGVLGVALCAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LGLAITTQVRQTESGDGLDTARPADLLVLLDSLQQREANLNKEIADLQQSLITMRASGTG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC NQAVINDAKARLSALSIMVGTVGATGPGVILTINDPGQGLGPEALLDIVNELRAAGAEAI CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE EITAGDKSVRIGVDSWIIGAPGQLVVDGTTLTPPYSVLAIGDPPTLAAAMNIPGGAVDTV EEEECCCEEEEECCEEEECCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHH SRVGGSVTIDQPARVDITTLREPKPRQYAQPGK HHCCCEEEECCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MLPPCGAGCLGREPVNQSHPGQPDPRLESHPGKHEMPKTRRPPTRSQITFGVLGVALCAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LGLAITTQVRQTESGDGLDTARPADLLVLLDSLQQREANLNKEIADLQQSLITMRASGTG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC NQAVINDAKARLSALSIMVGTVGATGPGVILTINDPGQGLGPEALLDIVNELRAAGAEAI CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE EITAGDKSVRIGVDSWIIGAPGQLVVDGTTLTPPYSVLAIGDPPTLAAAMNIPGGAVDTV EEEECCCEEEEECCEEEECCCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHH SRVGGSVTIDQPARVDITTLREPKPRQYAQPGK HHCCCEEEECCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]