| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629468
Identifier: 169629468
GI number: 169629468
Start: 2439948
End: 2440646
Strand: Direct
Name: 169629468
Synonym: MAB_2382
Alternate gene names: NA
Gene position: 2439948-2440646 (Clockwise)
Preceding gene: 169629467
Following gene: 169629469
Centisome position: 48.15
GC content: 61.95
Gene sequence:
>699_bases GTGAGTGCGACACCTACTGATACGTCCCCACCGCATCCGCCGGAGACCGCGGCGGACCGCTACTCACCGATCACCATGGA CCGCGTACGGGAGGTGATCGGATTTCCGGCCCGGTTCATCGCCGATAAGAAGGACACCGAGCTGAGGGAGTTCGCGGCCC GATTTATTGCACACAGCCCGTTTTTCTGTATGGCAACCGTAGGCGCCGATGGCCTGTTGGACACCAGTCCCAAGGGCGAC CCACCGGGCTCGGTGCGCATTCTCGATGCCCGGACTTTGGCGATTCCCGATCGACCGGGGAACAAACTCGCGGACAGCTT CGAGAACATCACCCGCAATCCCGCAGTGGGGTTGGTGTTCTTCGTTCCCGGCTTGCGCGAGGTGATCAGGGTGAACGGTG ATGCCTTCGTCACCGACGATCCCGAATTACTCGCCATGCTCAGCGCGGATGGTAAACCCGCGGTGCTCGCGACAATTGTG CGCATCCGCGAGGTGTTCGGCCAGTGCGGTAAGGCGGTCATCCGCGCGAAACTCTGGGAGGGTGATCAGCGCGGGCTCGC CGAGGCCGTGACCCTGGGCGGGGATTTCTACACGCTTACCATTGCCGAAAACGCCGCCAAGATGGCCGACAAATTGGGCC AACTCGCGGGCGGCATTCACGATCTCGTCGATGACAGCTACGCAAACGAGCTCTTCTGA
Upstream 100 bases:
>100_bases TTTTGTCCGAGGAGGACCGGGCGGCGGGGGATCGCATGTACATCTGCGTATCACGGGCGCTGACACCGCGACTGGTGCTC GATCTGTAAGGAGAATTCAC
Downstream 100 bases:
>100_bases CCGTCATCCCTCCGGCACCCTGTAGGCGGGCGCAACGGACGGAGGCTGAGATGACGACGGCGACCGATATACTGGCCGAG CTGGCCTCGCTTGAGGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Pyridoxamine 5-Phosphate Oxidase Family; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Related; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Fmn Flavoprotein; Transcriptional Regulator AraC Family
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSATPTDTSPPHPPETAADRYSPITMDRVREVIGFPARFIADKKDTELREFAARFIAHSPFFCMATVGADGLLDTSPKGD PPGSVRILDARTLAIPDRPGNKLADSFENITRNPAVGLVFFVPGLREVIRVNGDAFVTDDPELLAMLSADGKPAVLATIV RIREVFGQCGKAVIRAKLWEGDQRGLAEAVTLGGDFYTLTIAENAAKMADKLGQLAGGIHDLVDDSYANELF
Sequences:
>Translated_232_residues MSATPTDTSPPHPPETAADRYSPITMDRVREVIGFPARFIADKKDTELREFAARFIAHSPFFCMATVGADGLLDTSPKGD PPGSVRILDARTLAIPDRPGNKLADSFENITRNPAVGLVFFVPGLREVIRVNGDAFVTDDPELLAMLSADGKPAVLATIV RIREVFGQCGKAVIRAKLWEGDQRGLAEAVTLGGDFYTLTIAENAAKMADKLGQLAGGIHDLVDDSYANELF >Mature_231_residues SATPTDTSPPHPPETAADRYSPITMDRVREVIGFPARFIADKKDTELREFAARFIAHSPFFCMATVGADGLLDTSPKGDP PGSVRILDARTLAIPDRPGNKLADSFENITRNPAVGLVFFVPGLREVIRVNGDAFVTDDPELLAMLSADGKPAVLATIVR IREVFGQCGKAVIRAKLWEGDQRGLAEAVTLGGDFYTLTIAENAAKMADKLGQLAGGIHDLVDDSYANELF
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24986; Mature: 24854
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPTDTSPPHPPETAADRYSPITMDRVREVIGFPARFIADKKDTELREFAARFIAHSP CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCC FFCMATVGADGLLDTSPKGDPPGSVRILDARTLAIPDRPGNKLADSFENITRNPAVGLVF CEEEEECCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHHHHHHHHHCCCCCEEEE FVPGLREVIRVNGDAFVTDDPELLAMLSADGKPAVLATIVRIREVFGQCGKAVIRAKLWE EHHHHHHHHHCCCCEEECCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDQRGLAEAVTLGGDFYTLTIAENAAKMADKLGQLAGGIHDLVDDSYANELF CCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SATPTDTSPPHPPETAADRYSPITMDRVREVIGFPARFIADKKDTELREFAARFIAHSP CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCC FFCMATVGADGLLDTSPKGDPPGSVRILDARTLAIPDRPGNKLADSFENITRNPAVGLVF CEEEEECCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHHHHHHHHHCCCCCEEEE FVPGLREVIRVNGDAFVTDDPELLAMLSADGKPAVLATIVRIREVFGQCGKAVIRAKLWE EHHHHHHHHHCCCCEEECCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDQRGLAEAVTLGGDFYTLTIAENAAKMADKLGQLAGGIHDLVDDSYANELF CCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA