Click here to switch to the map view.

The map label for this gene is pobB [H]

Identifier: 169629467

GI number: 169629467

Start: 2438986

End: 2439936

Strand: Direct

Name: pobB [H]

Synonym: MAB_2381

Alternate gene names: 169629467

Gene position: 2438986-2439936 (Clockwise)

Preceding gene: 169629465

Following gene: 169629468

Centisome position: 48.13

GC content: 63.3

Gene sequence:

>951_bases
ATGAATGATACCGGTGCCACACTGAAGGTCGCCGTTCGGCAGCTTCGGTGGGAGGCCGATGGTGTGGTGTCCCTGCAGCT
CAGCTCCGCGTGCAACGAACCGCTACCGGCCTGGGAACCAGGCGCACATGTCGACCTAGTTCTGCCGACCGGCATCGAAC
GTCAATACTCGCTGTGCGGACCAGTCGACGACCGATCCGTCTACCAGGTAGGAGTTCGGCGCGAACGAACGAGTCGCGGC
GGCTCGGAGTACGTGCACGCCTTCCTGCGGCCCGGTCAACAGCTGAGGATCAAAGGACCGCGCAACAACTTCGGTCTGCA
CCGGGCGGACGGCTATCTGTTCATCGCAGCCGGAATCGGAATCACCCCCATCCTTCCGATGATCCGTCAAGCCCAGGACT
GGGGTGCGGACTGGACCCTGTACTACGGGGGCCACACGGCGGCATCGATGGCATTCCTTGAGGAACTCCGACAGTACGGG
CCGCGGGTGCATCTCTATCCGGCAGACGAAGTGGGCAGGATTCCTTTGCGGGAACTCACCACCGACGTCCGTCCCGGATT
GCAGATCTATGCCTGCGGACCAACCGAACTGATATCAGATCTCACTGCGGCAGTTTCGCATTGGCCGGCGGACACACTTC
ATGTCGAGCGGTTCAAGCCCATACCGTGCGCGCCCGCTGAGGACAAACCGGTCGACGTCACCTGTGCGGCGTCGCGCCAA
ACGATCGCGGTGCCGCCGGGACAGAGCATCCTCGCGGCGGTCGAACAGGCCGGCATCCAGGTCTCCGCATCGTGCCGCGC
GGGTGTATGTGGCTCGTGCGAGACGGCCGTGCTTGAGGGGGTGCCCGATCATCGTGATGACATTTTGTCCGAGGAGGACC
GGGCGGCGGGGGATCGCATGTACATCTGCGTATCACGGGCGCTGACACCGCGACTGGTGCTCGATCTGTAA

Upstream 100 bases:

>100_bases
CGCCACGCCTGGTTGTTTCGTCTGCGCGCATTGACATGTTATCGATGTTATCAGTATGTTTGAAGGAGAATTAACGTTGT
TAACAGATGGGCTGACAAGC

Downstream 100 bases:

>100_bases
GGAGAATTCACGTGAGTGCGACACCTACTGATACGTCCCCACCGCATCCGCCGGAGACCGCGGCGGACCGCTACTCACCG
ATCACCATGGACCGCGTACG

Product: oxidoreductase

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNDTGATLKVAVRQLRWEADGVVSLQLSSACNEPLPAWEPGAHVDLVLPTGIERQYSLCGPVDDRSVYQVGVRRERTSRG
GSEYVHAFLRPGQQLRIKGPRNNFGLHRADGYLFIAAGIGITPILPMIRQAQDWGADWTLYYGGHTAASMAFLEELRQYG
PRVHLYPADEVGRIPLRELTTDVRPGLQIYACGPTELISDLTAAVSHWPADTLHVERFKPIPCAPAEDKPVDVTCAASRQ
TIAVPPGQSILAAVEQAGIQVSASCRAGVCGSCETAVLEGVPDHRDDILSEEDRAAGDRMYICVSRALTPRLVLDL

Sequences:

>Translated_316_residues
MNDTGATLKVAVRQLRWEADGVVSLQLSSACNEPLPAWEPGAHVDLVLPTGIERQYSLCGPVDDRSVYQVGVRRERTSRG
GSEYVHAFLRPGQQLRIKGPRNNFGLHRADGYLFIAAGIGITPILPMIRQAQDWGADWTLYYGGHTAASMAFLEELRQYG
PRVHLYPADEVGRIPLRELTTDVRPGLQIYACGPTELISDLTAAVSHWPADTLHVERFKPIPCAPAEDKPVDVTCAASRQ
TIAVPPGQSILAAVEQAGIQVSASCRAGVCGSCETAVLEGVPDHRDDILSEEDRAAGDRMYICVSRALTPRLVLDL
>Mature_316_residues
MNDTGATLKVAVRQLRWEADGVVSLQLSSACNEPLPAWEPGAHVDLVLPTGIERQYSLCGPVDDRSVYQVGVRRERTSRG
GSEYVHAFLRPGQQLRIKGPRNNFGLHRADGYLFIAAGIGITPILPMIRQAQDWGADWTLYYGGHTAASMAFLEELRQYG
PRVHLYPADEVGRIPLRELTTDVRPGLQIYACGPTELISDLTAAVSHWPADTLHVERFKPIPCAPAEDKPVDVTCAASRQ
TIAVPPGQSILAAVEQAGIQVSASCRAGVCGSCETAVLEGVPDHRDDILSEEDRAAGDRMYICVSRALTPRLVLDL

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=321, Percent_Identity=39.8753894080997, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1787658, Length=344, Percent_Identity=26.1627906976744, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787098, Length=213, Percent_Identity=29.5774647887324, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34388; Mature: 34388

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTGATLKVAVRQLRWEADGVVSLQLSSACNEPLPAWEPGAHVDLVLPTGIERQYSLCG
CCCCCHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCEEEEEECCCCCCCHHCCC
PVDDRSVYQVGVRRERTSRGGSEYVHAFLRPGQQLRIKGPRNNFGLHRADGYLFIAAGIG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEECCC
ITPILPMIRQAQDWGADWTLYYGGHTAASMAFLEELRQYGPRVHLYPADEVGRIPLRELT
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHH
TDVRPGLQIYACGPTELISDLTAAVSHWPADTLHVERFKPIPCAPAEDKPVDVTCAASRQ
HHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
TIAVPPGQSILAAVEQAGIQVSASCRAGVCGSCETAVLEGVPDHRDDILSEEDRAAGDRM
EEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCCCHHHHCCCCHHCCCCEE
YICVSRALTPRLVLDL
EEEEECCCCCEEEEEC
>Mature Secondary Structure
MNDTGATLKVAVRQLRWEADGVVSLQLSSACNEPLPAWEPGAHVDLVLPTGIERQYSLCG
CCCCCHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCCEEEEEECCCCCCCHHCCC
PVDDRSVYQVGVRRERTSRGGSEYVHAFLRPGQQLRIKGPRNNFGLHRADGYLFIAAGIG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEECCC
ITPILPMIRQAQDWGADWTLYYGGHTAASMAFLEELRQYGPRVHLYPADEVGRIPLRELT
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHH
TDVRPGLQIYACGPTELISDLTAAVSHWPADTLHVERFKPIPCAPAEDKPVDVTCAASRQ
HHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCC
TIAVPPGQSILAAVEQAGIQVSASCRAGVCGSCETAVLEGVPDHRDDILSEEDRAAGDRM
EEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCCCHHHHCCCCHHCCCCEE
YICVSRALTPRLVLDL
EEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]