| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is rhlE [H]
Identifier: 169629244
GI number: 169629244
Start: 2172116
End: 2173432
Strand: Reverse
Name: rhlE [H]
Synonym: MAB_2158c
Alternate gene names: 169629244
Gene position: 2173432-2172116 (Counterclockwise)
Preceding gene: 169629246
Following gene: 169629241
Centisome position: 42.89
GC content: 66.89
Gene sequence:
>1317_bases GTGCCGGCACCCCTTGTCAACGTCCTGACTCGGGGCGGTATTGACGCGCCCTTCCCGATCCAGGCGGCTACTCTGCCGGA TACTCTCGGCGGCCGCGACGTGTTGGCGCGCGGCAAGACCGGTAGCGGCAAGACCCTCGGTTTTTCTATCCCCGTGGTCG CGCGAATCGCCGACGGCACGCGCGTGCCGGGCCGGCCGCGCGCGCTCGTGTTGGCCCCCACTCGCGAACTGGCCACCCAG ATCAGTGCCGTCATCGAGCCGCTGGCGGCCGCCTACCGGATGAAAGTCACCACCATCTTCGGCGGGGTTTCGCAGCATCG GCAGGTCCAGGCGCTCAAGGCCGGAGTGGACATTGTGGTCGCATGCCCGGGCCGGCTGGACGACCTGCTCAAGCAGGGCC ACCTGACATTGGACGGTATCGAGATCAGCGTCCTGGACGAGGCCGATCACATGGCCGATCTCGGATTTCTGCCGGTCGTC ACCCGCCTACTGGCCGCGACACCGAGCTCCGGTCAGCGTCTGCTGTTCTCAGCCACGCTGGATAACGATGTCGACAAGTT GGTCAAGAGATTCCTGCACTCCCCGGCCGAGCATTCGGTTGATCCCGTCGACTCCCCCGTCGCGGCAATGACGCATCACG TTTTCGCGGTCGCCGGCCCCGACGCCAAACGCGAGCTGATCAACACCCTGGCTTCCGGTACTGGGCGCCGAATCTTGTTC ATGCGCACGAAGCACCATGCGAAGCGGCTTGCCCGTCAACTCACCCAGTCGGGCATTCCGTCGGTTGACTTGCACGGCAA TCTATCCCAGGGCGCACGCGACCGGAACCTGGCCGCATTCGCCAACGGCGAAGCCCGGGTGCTGGTGGCCACCGATGTCG CGGCCCGTGGGGTTCACGTCGACGATGTCGCCCTGGTGGTGCATGTCGATCCTCCGGCAGAACACAAGGCATACCTACAC CGGTCCGGGCGGACGGCCCGCGCGGGTGGCACCGGCGATGTGGTGACGCTGGTTCTGCCCGAACAACGTCGCGATGTCGA CGCACTGCTGCGCAAAGCCGCCATCAAGGCCACCCCACGCCAGGTGACCGCCGATTCGGTTGAGGTCGCCAATTTGGTGG GTGAGGTCGCACCCTACGTGAAACCTGTGCCAGCGCAAAAGACTTCACAACCGGCGGCGACCAACAACCGGCCCGCCCGT CGGGTGCGCAAGCACACCGAGGCCGGCGAAGGCCGTCCGGCACGTACGCCGCGGCGTGGCGGCGGCCGCGGTCAGCAGCG CCCCACCCGCAAGGCGGGAAATAGCGGCTCCCGGTAG
Upstream 100 bases:
>100_bases ATCGGCAATCTCGCCACTTCCAAGCCTCGAAAGGCGTATCACTGCTGTGTCTTCAACCTCTACAACTTCAACCTCTACAA CGACATTCGCCTCACTCGGG
Downstream 100 bases:
>100_bases CCCGACAAGCCACCTACACCTGCGCCGCGGCGCGTGATGCCGCCTTCTCTTCGTAGTACTTTGCGCGTTCATCCACGGCG GCAAGGAATTTCGCTAAGGT
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MPAPLVNVLTRGGIDAPFPIQAATLPDTLGGRDVLARGKTGSGKTLGFSIPVVARIADGTRVPGRPRALVLAPTRELATQ ISAVIEPLAAAYRMKVTTIFGGVSQHRQVQALKAGVDIVVACPGRLDDLLKQGHLTLDGIEISVLDEADHMADLGFLPVV TRLLAATPSSGQRLLFSATLDNDVDKLVKRFLHSPAEHSVDPVDSPVAAMTHHVFAVAGPDAKRELINTLASGTGRRILF MRTKHHAKRLARQLTQSGIPSVDLHGNLSQGARDRNLAAFANGEARVLVATDVAARGVHVDDVALVVHVDPPAEHKAYLH RSGRTARAGGTGDVVTLVLPEQRRDVDALLRKAAIKATPRQVTADSVEVANLVGEVAPYVKPVPAQKTSQPAATNNRPAR RVRKHTEAGEGRPARTPRRGGGRGQQRPTRKAGNSGSR
Sequences:
>Translated_438_residues MPAPLVNVLTRGGIDAPFPIQAATLPDTLGGRDVLARGKTGSGKTLGFSIPVVARIADGTRVPGRPRALVLAPTRELATQ ISAVIEPLAAAYRMKVTTIFGGVSQHRQVQALKAGVDIVVACPGRLDDLLKQGHLTLDGIEISVLDEADHMADLGFLPVV TRLLAATPSSGQRLLFSATLDNDVDKLVKRFLHSPAEHSVDPVDSPVAAMTHHVFAVAGPDAKRELINTLASGTGRRILF MRTKHHAKRLARQLTQSGIPSVDLHGNLSQGARDRNLAAFANGEARVLVATDVAARGVHVDDVALVVHVDPPAEHKAYLH RSGRTARAGGTGDVVTLVLPEQRRDVDALLRKAAIKATPRQVTADSVEVANLVGEVAPYVKPVPAQKTSQPAATNNRPAR RVRKHTEAGEGRPARTPRRGGGRGQQRPTRKAGNSGSR >Mature_437_residues PAPLVNVLTRGGIDAPFPIQAATLPDTLGGRDVLARGKTGSGKTLGFSIPVVARIADGTRVPGRPRALVLAPTRELATQI SAVIEPLAAAYRMKVTTIFGGVSQHRQVQALKAGVDIVVACPGRLDDLLKQGHLTLDGIEISVLDEADHMADLGFLPVVT RLLAATPSSGQRLLFSATLDNDVDKLVKRFLHSPAEHSVDPVDSPVAAMTHHVFAVAGPDAKRELINTLASGTGRRILFM RTKHHAKRLARQLTQSGIPSVDLHGNLSQGARDRNLAAFANGEARVLVATDVAARGVHVDDVALVVHVDPPAEHKAYLHR SGRTARAGGTGDVVTLVLPEQRRDVDALLRKAAIKATPRQVTADSVEVANLVGEVAPYVKPVPAQKTSQPAATNNRPARR VRKHTEAGEGRPARTPRRGGGRGQQRPTRKAGNSGSR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4758138, Length=379, Percent_Identity=34.5646437994723, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI148613856, Length=379, Percent_Identity=33.7730870712401, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI38201710, Length=379, Percent_Identity=33.7730870712401, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=34.5945945945946, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI50659095, Length=371, Percent_Identity=35.0404312668464, Blast_Score=204, Evalue=9e-53, Organism=Homo sapiens, GI41327773, Length=361, Percent_Identity=33.7950138504155, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=34.0974212034384, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI41327771, Length=374, Percent_Identity=32.0855614973262, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=33.5243553008596, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI224593278, Length=425, Percent_Identity=33.6470588235294, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI262118318, Length=378, Percent_Identity=32.5396825396825, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI216548263, Length=378, Percent_Identity=32.5396825396825, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI13518015, Length=378, Percent_Identity=32.5396825396825, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI262231852, Length=378, Percent_Identity=32.5396825396825, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI164419743, Length=346, Percent_Identity=34.1040462427746, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI51094101, Length=346, Percent_Identity=34.1040462427746, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=34.5505617977528, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=34.5505617977528, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI169881239, Length=362, Percent_Identity=34.5303867403315, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI13514809, Length=362, Percent_Identity=34.5303867403315, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI301171467, Length=338, Percent_Identity=35.5029585798817, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI301171475, Length=338, Percent_Identity=35.5029585798817, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI87196351, Length=338, Percent_Identity=35.5029585798817, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI20149629, Length=336, Percent_Identity=34.2261904761905, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI164664518, Length=352, Percent_Identity=30.9659090909091, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI55749865, Length=342, Percent_Identity=32.7485380116959, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=31.8181818181818, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI31542656, Length=385, Percent_Identity=31.6883116883117, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI7661920, Length=330, Percent_Identity=30.3030303030303, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI38327634, Length=333, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI21040371, Length=342, Percent_Identity=29.5321637426901, Blast_Score=158, Evalue=9e-39, Organism=Homo sapiens, GI41327779, Length=396, Percent_Identity=30.050505050505, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI83700235, Length=335, Percent_Identity=31.3432835820896, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI9506931, Length=377, Percent_Identity=31.5649867374005, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=32.6815642458101, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=30.0561797752809, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI38569503, Length=369, Percent_Identity=33.0623306233062, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI4758112, Length=342, Percent_Identity=29.5321637426901, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI18375623, Length=342, Percent_Identity=29.5321637426901, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI41327776, Length=335, Percent_Identity=31.3432835820896, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI154759257, Length=411, Percent_Identity=31.8734793187348, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI17505907, Length=387, Percent_Identity=29.4573643410853, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI13514831, Length=378, Percent_Identity=30.4232804232804, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=351, Percent_Identity=31.3390313390313, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI164419732, Length=338, Percent_Identity=30.7692307692308, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI256223453, Length=366, Percent_Identity=26.775956284153, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI8922886, Length=339, Percent_Identity=30.0884955752212, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI9966805, Length=312, Percent_Identity=33.6538461538462, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI6005743, Length=339, Percent_Identity=29.4985250737463, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI62241022, Length=339, Percent_Identity=29.4985250737463, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI62241024, Length=318, Percent_Identity=29.2452830188679, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI256773275, Length=356, Percent_Identity=30.0561797752809, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=189, Percent_Identity=37.037037037037, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1787016, Length=349, Percent_Identity=42.9799426934097, Blast_Score=264, Evalue=9e-72, Organism=Escherichia coli, GI87082221, Length=346, Percent_Identity=36.9942196531792, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1790214, Length=353, Percent_Identity=38.2436260623229, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1787605, Length=381, Percent_Identity=36.2204724409449, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1788930, Length=314, Percent_Identity=37.2611464968153, Blast_Score=190, Evalue=1e-49, Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=37.1757925072046, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI86570094, Length=350, Percent_Identity=37.4285714285714, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=34.0425531914894, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=34.0425531914894, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=32.7225130890052, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=34.0425531914894, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=34.5945945945946, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI32565321, Length=373, Percent_Identity=31.9034852546917, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17555296, Length=347, Percent_Identity=36.8876080691643, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17510559, Length=362, Percent_Identity=33.4254143646409, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17552114, Length=355, Percent_Identity=31.2676056338028, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17552642, Length=340, Percent_Identity=33.8235294117647, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71987143, Length=328, Percent_Identity=31.0975609756098, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI71999646, Length=336, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71999644, Length=340, Percent_Identity=32.9411764705882, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI71995724, Length=328, Percent_Identity=31.4024390243902, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17507121, Length=328, Percent_Identity=31.4024390243902, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17509811, Length=357, Percent_Identity=31.0924369747899, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=32.0512820512821, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71982858, Length=334, Percent_Identity=31.437125748503, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17505370, Length=381, Percent_Identity=31.2335958005249, Blast_Score=160, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17507945, Length=350, Percent_Identity=30.2857142857143, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=32.8877005347594, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17507877, Length=383, Percent_Identity=27.9373368146214, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI115532548, Length=402, Percent_Identity=30.5970149253731, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI115532546, Length=349, Percent_Identity=31.8051575931232, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI71990816, Length=404, Percent_Identity=30.9405940594059, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17507881, Length=365, Percent_Identity=28.4931506849315, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17556951, Length=331, Percent_Identity=29.0030211480363, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17507879, Length=399, Percent_Identity=27.8195488721804, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI193206561, Length=339, Percent_Identity=30.6784660766962, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI193208216, Length=361, Percent_Identity=29.9168975069252, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17508543, Length=361, Percent_Identity=29.0858725761773, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI25148203, Length=379, Percent_Identity=26.1213720316623, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17536099, Length=370, Percent_Identity=28.1081081081081, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17536101, Length=369, Percent_Identity=27.6422764227642, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17536103, Length=370, Percent_Identity=28.1081081081081, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148291, Length=354, Percent_Identity=26.271186440678, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71997889, Length=478, Percent_Identity=24.6861924686192, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI25148205, Length=323, Percent_Identity=25.3869969040248, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17553716, Length=323, Percent_Identity=24.4582043343653, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71982862, Length=184, Percent_Identity=33.1521739130435, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71987152, Length=83, Percent_Identity=38.5542168674699, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324217, Length=376, Percent_Identity=33.7765957446808, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6324778, Length=372, Percent_Identity=35.2150537634409, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6325138, Length=352, Percent_Identity=36.0795454545455, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321856, Length=385, Percent_Identity=35.3246753246753, Blast_Score=199, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6323021, Length=441, Percent_Identity=32.6530612244898, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321360, Length=336, Percent_Identity=35.7142857142857, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6320224, Length=352, Percent_Identity=30.3977272727273, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=350, Percent_Identity=34, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6320041, Length=386, Percent_Identity=28.4974093264249, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6323947, Length=353, Percent_Identity=30.8781869688385, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6322912, Length=310, Percent_Identity=31.9354838709677, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6322323, Length=310, Percent_Identity=31.9354838709677, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6319714, Length=354, Percent_Identity=29.3785310734463, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6321963, Length=352, Percent_Identity=32.9545454545455, Blast_Score=159, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6320119, Length=349, Percent_Identity=29.7994269340974, Blast_Score=156, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6322427, Length=348, Percent_Identity=32.183908045977, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=336, Percent_Identity=30.6547619047619, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=29.1866028708134, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=28, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320400, Length=358, Percent_Identity=30.4469273743017, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324620, Length=376, Percent_Identity=29.7872340425532, Blast_Score=136, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6323306, Length=406, Percent_Identity=25.8620689655172, Blast_Score=126, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6320173, Length=221, Percent_Identity=34.3891402714932, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=417, Percent_Identity=27.5779376498801, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=399, Percent_Identity=24.0601503759398, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI28574962, Length=370, Percent_Identity=35.1351351351351, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=36.01108033241, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=34.8773841961853, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24644479, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI281361218, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24644481, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24644487, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI45551833, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24644485, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24644483, Length=372, Percent_Identity=34.6774193548387, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24584994, Length=393, Percent_Identity=32.824427480916, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=31.5340909090909, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=32.6370757180157, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI28575014, Length=339, Percent_Identity=35.9882005899705, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24662330, Length=373, Percent_Identity=32.4396782841823, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=33.2378223495702, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI21356161, Length=420, Percent_Identity=32.8571428571429, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=32.4175824175824, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=35.7377049180328, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=32.4175824175824, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24645031, Length=328, Percent_Identity=30.7926829268293, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24585582, Length=325, Percent_Identity=34.1538461538462, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17136814, Length=356, Percent_Identity=34.5505617977528, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI17977678, Length=389, Percent_Identity=30.8483290488432, Blast_Score=168, Evalue=9e-42, Organism=Drosophila melanogaster, GI24582080, Length=312, Percent_Identity=30.4487179487179, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24582078, Length=312, Percent_Identity=30.4487179487179, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI17136248, Length=312, Percent_Identity=30.4487179487179, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24582075, Length=312, Percent_Identity=30.4487179487179, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI28571808, Length=334, Percent_Identity=31.7365269461078, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI28571809, Length=334, Percent_Identity=31.7365269461078, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI21355559, Length=363, Percent_Identity=31.6804407713499, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24581954, Length=334, Percent_Identity=29.3413173652695, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI24581952, Length=334, Percent_Identity=29.3413173652695, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI24581956, Length=334, Percent_Identity=29.3413173652695, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI17647335, Length=347, Percent_Identity=29.1066282420749, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24666101, Length=353, Percent_Identity=33.7110481586402, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI19920478, Length=412, Percent_Identity=27.6699029126214, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI24642822, Length=390, Percent_Identity=26.6666666666667, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=30.3827751196172, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI20130173, Length=309, Percent_Identity=31.7152103559871, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24668515, Length=336, Percent_Identity=30.0595238095238, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI24643725, Length=374, Percent_Identity=28.0748663101604, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=34.5177664974619, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=34.5177664974619, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI24640164, Length=337, Percent_Identity=22.2551928783383, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 46454; Mature: 46323
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPLVNVLTRGGIDAPFPIQAATLPDTLGGRDVLARGKTGSGKTLGFSIPVVARIADGT CCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHEECCCCCCCCEEEEECCEEEEECCCC RVPGRPRALVLAPTRELATQISAVIEPLAAAYRMKVTTIFGGVSQHRQVQALKAGVDIVV CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE ACPGRLDDLLKQGHLTLDGIEISVLDEADHMADLGFLPVVTRLLAATPSSGQRLLFSATL ECCCHHHHHHHCCCEEECCEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECC DNDVDKLVKRFLHSPAEHSVDPVDSPVAAMTHHVFAVAGPDAKRELINTLASGTGRRILF CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEEEECCHHHHHHHHHHHCCCCCEEEE MRTKHHAKRLARQLTQSGIPSVDLHGNLSQGARDRNLAAFANGEARVLVATDVAARGVHV EECHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEEECHHHCCCEE DDVALVVHVDPPAEHKAYLHRSGRTARAGGTGDVVTLVLPEQRRDVDALLRKAAIKATPR CCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC QVTADSVEVANLVGEVAPYVKPVPAQKTSQPAATNNRPARRVRKHTEAGEGRPARTPRRG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC GGRGQQRPTRKAGNSGSR CCCCCCCCCHHCCCCCCC >Mature Secondary Structure PAPLVNVLTRGGIDAPFPIQAATLPDTLGGRDVLARGKTGSGKTLGFSIPVVARIADGT CCHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHEECCCCCCCCEEEEECCEEEEECCCC RVPGRPRALVLAPTRELATQISAVIEPLAAAYRMKVTTIFGGVSQHRQVQALKAGVDIVV CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE ACPGRLDDLLKQGHLTLDGIEISVLDEADHMADLGFLPVVTRLLAATPSSGQRLLFSATL ECCCHHHHHHHCCCEEECCEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECC DNDVDKLVKRFLHSPAEHSVDPVDSPVAAMTHHVFAVAGPDAKRELINTLASGTGRRILF CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEEEECCHHHHHHHHHHHCCCCCEEEE MRTKHHAKRLARQLTQSGIPSVDLHGNLSQGARDRNLAAFANGEARVLVATDVAARGVHV EECHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEEECHHHCCCEE DDVALVVHVDPPAEHKAYLHRSGRTARAGGTGDVVTLVLPEQRRDVDALLRKAAIKATPR CCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC QVTADSVEVANLVGEVAPYVKPVPAQKTSQPAATNNRPARRVRKHTEAGEGRPARTPRRG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC GGRGQQRPTRKAGNSGSR CCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]