| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629241
Identifier: 169629241
GI number: 169629241
Start: 2168065
End: 2168946
Strand: Reverse
Name: 169629241
Synonym: MAB_2155c
Alternate gene names: NA
Gene position: 2168946-2168065 (Counterclockwise)
Preceding gene: 169629244
Following gene: 169629240
Centisome position: 42.8
GC content: 66.1
Gene sequence:
>882_bases ATGAGTGAGACCACGCGAGACCGGCCGGTGCGCCGGCCCGCGCTGTCTCCTTCGCGTGCCAGCGACTTCAAACAGTGCCC GCTGCTGTATCGGCTCCGCGCGATCGATCGGCTCCCCGAACCACCCTCGGCCGCACAGGCCCGCGGCAGCCTGGTGCACG CCGCCCTGGAGGACCTGTACACACGGCCCGCCGCCGAACGCGAGTACGCCACCGCTGCCGGACTGGTGGAACCTGCCTGG GAACGCCTGGTGGAATCGAACCCCGAGCTGGCCGAGGTGGTCGAGGCCGAGCGCCTTCCCCGATTCTTCGACGAGGCACG GGACCTGTTGTCGGGCTACTACCGGCTCGAAGACCCGACCCGATTCGATCCCGATAGTTGCGAGGAACGCGTCGAGGTCG AGCTCGCCGACGGAACCATGCTGCGCGGTTTCATCGACCGCATCGACATCGCGCCCGGCGGTGCGATGCGACTCGTCGAC TACAAGACCGGACGCGCACCGCGCGCCTTGTTCGAAGCCAAGGCGCTTTTTCAGATGAAGTTCTATGCCGTCGCCCTGTA CCGCACCCGCGGCGTGGTTCCCCGGCGGCTCCGCCTGCTGTACCTGTCTGATGGCGAGGTGCTCGACTACGCCCCCGATG AAGCCGAGCTACTCAAGTTCGAGAAGACGTTGATGGCGATCTGGCGAGCGATTCAGAACATCGGCACCACAGGCGATTTC CGGCCCAATCCGTCCCGGCTGTGCGATTGGTGCGCCCACCAATCGCTGTGTCCGGCGTTCGGCGGCACACCGCCGCCCTA CCCGGGATGGCCTGCAGATTACGGTGTCGCCGACGCTGATATCGAAGACACTGCGACCTCAATCTCGGGAGATGCCGCAT GA
Upstream 100 bases:
>100_bases ACTTTGGGGACGACTTGTGACATGTGTTGAACAAGGCTCGCTGGTTTTGTGCCCGGCGTGGCGTCGGCGCCTGTCGGAGT CCCTGCCTAGGCTGCCAGCT
Downstream 100 bases:
>100_bases CCTTGGACCTGACGGGCTGTTACTACCGGCGTCTGGATGCCGACGGCGAATTTCAGGTGTTCGAGTCGACCGAACTCACC GCCAGCGGCTGGGGGCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: RecB Family Exonuclease-Like Protein; UvrD/REP Helicase; Superfamily I Helicase; RecB Family Protein Exonuclease; Recb Family Exonuclease
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSETTRDRPVRRPALSPSRASDFKQCPLLYRLRAIDRLPEPPSAAQARGSLVHAALEDLYTRPAAEREYATAAGLVEPAW ERLVESNPELAEVVEAERLPRFFDEARDLLSGYYRLEDPTRFDPDSCEERVEVELADGTMLRGFIDRIDIAPGGAMRLVD YKTGRAPRALFEAKALFQMKFYAVALYRTRGVVPRRLRLLYLSDGEVLDYAPDEAELLKFEKTLMAIWRAIQNIGTTGDF RPNPSRLCDWCAHQSLCPAFGGTPPPYPGWPADYGVADADIEDTATSISGDAA
Sequences:
>Translated_293_residues MSETTRDRPVRRPALSPSRASDFKQCPLLYRLRAIDRLPEPPSAAQARGSLVHAALEDLYTRPAAEREYATAAGLVEPAW ERLVESNPELAEVVEAERLPRFFDEARDLLSGYYRLEDPTRFDPDSCEERVEVELADGTMLRGFIDRIDIAPGGAMRLVD YKTGRAPRALFEAKALFQMKFYAVALYRTRGVVPRRLRLLYLSDGEVLDYAPDEAELLKFEKTLMAIWRAIQNIGTTGDF RPNPSRLCDWCAHQSLCPAFGGTPPPYPGWPADYGVADADIEDTATSISGDAA >Mature_292_residues SETTRDRPVRRPALSPSRASDFKQCPLLYRLRAIDRLPEPPSAAQARGSLVHAALEDLYTRPAAEREYATAAGLVEPAWE RLVESNPELAEVVEAERLPRFFDEARDLLSGYYRLEDPTRFDPDSCEERVEVELADGTMLRGFIDRIDIAPGGAMRLVDY KTGRAPRALFEAKALFQMKFYAVALYRTRGVVPRRLRLLYLSDGEVLDYAPDEAELLKFEKTLMAIWRAIQNIGTTGDFR PNPSRLCDWCAHQSLCPAFGGTPPPYPGWPADYGVADADIEDTATSISGDAA
Specific function: Unknown
COG id: COG2887
COG function: function code L; RecB family exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32773; Mature: 32642
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETTRDRPVRRPALSPSRASDFKQCPLLYRLRAIDRLPEPPSAAQARGSLVHAALEDLY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TRPAAEREYATAAGLVEPAWERLVESNPELAEVVEAERLPRFFDEARDLLSGYYRLEDPT CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RFDPDSCEERVEVELADGTMLRGFIDRIDIAPGGAMRLVDYKTGRAPRALFEAKALFQMK CCCCHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH FYAVALYRTRGVVPRRLRLLYLSDGEVLDYAPDEAELLKFEKTLMAIWRAIQNIGTTGDF HHHHHHHHHCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC RPNPSRLCDWCAHQSLCPAFGGTPPPYPGWPADYGVADADIEDTATSISGDAA CCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure SETTRDRPVRRPALSPSRASDFKQCPLLYRLRAIDRLPEPPSAAQARGSLVHAALEDLY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TRPAAEREYATAAGLVEPAWERLVESNPELAEVVEAERLPRFFDEARDLLSGYYRLEDPT CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RFDPDSCEERVEVELADGTMLRGFIDRIDIAPGGAMRLVDYKTGRAPRALFEAKALFQMK CCCCHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH FYAVALYRTRGVVPRRLRLLYLSDGEVLDYAPDEAELLKFEKTLMAIWRAIQNIGTTGDF HHHHHHHHHCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC RPNPSRLCDWCAHQSLCPAFGGTPPPYPGWPADYGVADADIEDTATSISGDAA CCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA