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The map label for this gene is yhiX [C]

Identifier: 169629137

GI number: 169629137

Start: 2050944

End: 2051948

Strand: Direct

Name: yhiX [C]

Synonym: MAB_2050

Alternate gene names: 169629137

Gene position: 2050944-2051948 (Clockwise)

Preceding gene: 169629133

Following gene: 169629138

Centisome position: 40.48

GC content: 60.1

Gene sequence:

>1005_bases
GTGAAACTCGACGACTCGGGTATGCCAGCGCTGGCTTTCCTGCAGATGCTGGACAGTGAGGCGCTGGGGCATGACGCCAG
CATTGCGCTGCGCAGCATCATGGTTCGCGAGCACGTCACCGAGTCGATGTTGGTGGGCCGCGACGCGCAGGTCCCCTTAC
GGTGGTTCAGGGAGATATATTCCGATTTCGATTGTGATCAGGGAACCCGTCTGGGTTTCGCGTTCGCTGAACACGCCAAA
CTGACGTCCTTTGGGGCACTCAGTGTTCCCTTGGTCAGCGCGGGCTCGGTAGCCGAGGTTGTCGAGTTGCTTGCTTATCT
GCCGGTGATCACCACAGCCCTCAGCCCGTCGTTCCATTCGACGGAACGCGGCCTCACGATCGGGCTCACCGGTCGCACCG
GTGACGCGGGCCTGAACTGCCTGGCCGTCACCTACGGTGGGCTGGCGCTGTTGCGTCTGCTCGACATGCTCGCGGGTGCC
GTACCGAATATTGAACTGCATCTGAGTCATTCAGCGCCGGAGTCGTGGGTTCTTCATGACGAAGTGTTGGCGGGTCGGAT
CTTCTTCGACGCCCCCAGCTCGTTCGTCCACGTTCCCGCGGCTACGCTGGAGGAGGTCTGTCGATTCTCCGATCCTGTGG
CGTACCGGATTGCCGTCACCGATTTGCAGCGAACTCTCGATCAACGACGTGACACGTCGGTCTCCGAAAAAGTAAGGGAC
CTGCTCGAGAAAGATCCCGGAAAAACGAACATCAGCCGGACGGCGGGCGAGCTCTCGATATCCCCGAGCACGTTGAAGCG
GCGCCTGCGCGAAGAGGGGACCACCTTTCGAGAATTACGTCAGTCGTTCTTGCAGGAGCGAGCAATTCTGCGAATTCTCG
ACAGATCGGTGTCTGTAAGCGAGATCGCGGCAGAACTCGGGTACGCGGACCTCACGAACTTCACACATGCGTTCAAACGG
TGGACCGGTCGGTCACCGCGCCACTTCAGAAAAACGCGCGACTGA

Upstream 100 bases:

>100_bases
AATCTGGAACTTCTCTTTTTAGTGTTGTCGCGCGTGACCAGCGTCGCTAGACTCGCAGGAGTCAAAGAGTTGTGTTTTTA
GCTCACGCGCAGGGAGGCAC

Downstream 100 bases:

>100_bases
GCGCGCAAAGTTCCGCCCGGGCGCGTGCCGGGCGTCCACCGGAACCAGCGGGCTTCGCGATCGGCCTCATCTGTCACCTG
GACATCGTCGAGAAACGACA

Product: putative HTH-type transcriptional regulator AraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKLDDSGMPALAFLQMLDSEALGHDASIALRSIMVREHVTESMLVGRDAQVPLRWFREIYSDFDCDQGTRLGFAFAEHAK
LTSFGALSVPLVSAGSVAEVVELLAYLPVITTALSPSFHSTERGLTIGLTGRTGDAGLNCLAVTYGGLALLRLLDMLAGA
VPNIELHLSHSAPESWVLHDEVLAGRIFFDAPSSFVHVPAATLEEVCRFSDPVAYRIAVTDLQRTLDQRRDTSVSEKVRD
LLEKDPGKTNISRTAGELSISPSTLKRRLREEGTTFRELRQSFLQERAILRILDRSVSVSEIAAELGYADLTNFTHAFKR
WTGRSPRHFRKTRD

Sequences:

>Translated_334_residues
MKLDDSGMPALAFLQMLDSEALGHDASIALRSIMVREHVTESMLVGRDAQVPLRWFREIYSDFDCDQGTRLGFAFAEHAK
LTSFGALSVPLVSAGSVAEVVELLAYLPVITTALSPSFHSTERGLTIGLTGRTGDAGLNCLAVTYGGLALLRLLDMLAGA
VPNIELHLSHSAPESWVLHDEVLAGRIFFDAPSSFVHVPAATLEEVCRFSDPVAYRIAVTDLQRTLDQRRDTSVSEKVRD
LLEKDPGKTNISRTAGELSISPSTLKRRLREEGTTFRELRQSFLQERAILRILDRSVSVSEIAAELGYADLTNFTHAFKR
WTGRSPRHFRKTRD
>Mature_334_residues
MKLDDSGMPALAFLQMLDSEALGHDASIALRSIMVREHVTESMLVGRDAQVPLRWFREIYSDFDCDQGTRLGFAFAEHAK
LTSFGALSVPLVSAGSVAEVVELLAYLPVITTALSPSFHSTERGLTIGLTGRTGDAGLNCLAVTYGGLALLRLLDMLAGA
VPNIELHLSHSAPESWVLHDEVLAGRIFFDAPSSFVHVPAATLEEVCRFSDPVAYRIAVTDLQRTLDQRRDTSVSEKVRD
LLEKDPGKTNISRTAGELSISPSTLKRRLREEGTTFRELRQSFLQERAILRILDRSVSVSEIAAELGYADLTNFTHAFKR
WTGRSPRHFRKTRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36941; Mature: 36941

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDDSGMPALAFLQMLDSEALGHDASIALRSIMVREHVTESMLVGRDAQVPLRWFREIY
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SDFDCDQGTRLGFAFAEHAKLTSFGALSVPLVSAGSVAEVVELLAYLPVITTALSPSFHS
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
TERGLTIGLTGRTGDAGLNCLAVTYGGLALLRLLDMLAGAVPNIELHLSHSAPESWVLHD
CCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHH
EVLAGRIFFDAPSSFVHVPAATLEEVCRFSDPVAYRIAVTDLQRTLDQRRDTSVSEKVRD
HHHHCEEEECCCCCEEECCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHH
LLEKDPGKTNISRTAGELSISPSTLKRRLREEGTTFRELRQSFLQERAILRILDRSVSVS
HHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
EIAAELGYADLTNFTHAFKRWTGRSPRHFRKTRD
HHHHHHCHHHHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MKLDDSGMPALAFLQMLDSEALGHDASIALRSIMVREHVTESMLVGRDAQVPLRWFREIY
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SDFDCDQGTRLGFAFAEHAKLTSFGALSVPLVSAGSVAEVVELLAYLPVITTALSPSFHS
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
TERGLTIGLTGRTGDAGLNCLAVTYGGLALLRLLDMLAGAVPNIELHLSHSAPESWVLHD
CCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHH
EVLAGRIFFDAPSSFVHVPAATLEEVCRFSDPVAYRIAVTDLQRTLDQRRDTSVSEKVRD
HHHHCEEEECCCCCEEECCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHH
LLEKDPGKTNISRTAGELSISPSTLKRRLREEGTTFRELRQSFLQERAILRILDRSVSVS
HHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
EIAAELGYADLTNFTHAFKRWTGRSPRHFRKTRD
HHHHHHCHHHHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]