| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629138
Identifier: 169629138
GI number: 169629138
Start: 2052231
End: 2053397
Strand: Direct
Name: 169629138
Synonym: MAB_2051
Alternate gene names: NA
Gene position: 2052231-2053397 (Clockwise)
Preceding gene: 169629137
Following gene: 169629139
Centisome position: 40.5
GC content: 67.78
Gene sequence:
>1167_bases ATGCCACACGACCAGCCGGCCATCATCGGTGCCGCCGAAGTCGCTCCAGGAAGAAACGTTCCGTACACCTCCACTGAATT GCATGTGCGCGCCGCGGTCGCGGCTCTCGCCGACGCAGGGGTGGTCCCAGACGAGGTCGACGGTCTCGTGTGCGCCGGGC CGATGACGAACGAGGGTTCGATCTTCCTGTCCGAGGACCTCATGGACTATCTCGGGCTGCACAACCTGAAACTTCAGATG ACCTGTCAGCTTGGCGGCGGGACCCATCTGGCCATGACGCGCATGGCGAGTAACGTCATCGCCCGGGGCGAGGCCGAGAC GGTGCTGGTCGTGTCGGCGGGCAAGTTTCCACCGATCCGCGATGGCGGGCGCGAACTGATGGCGCTGGTGTGTGACCACG CGTTCGAGATGCCCTACGGACCCTCCGTGCCGGCGCTGTACGGTTTGATCGCGCAGGCCTGGATGCACGAGACGGGACAG GGCAAGGCGGACATCGCCGAGGTCACCGCGTCGCAGGACCGGTGGGCCGCGCTGAATCCCGCGGCGATCGCGCACCGCTC ACAACGCCTGACTGTGGAGGACGTGCTGGCGTCCCGCCCGATCGCCGGGCCGTTCCACTTCTACCACTGCTCGATTCCCT GCGAGGGCGGTGGCGCGCTCGTGCTGGGCTCGGCCCGCCGGGCTCGCGCGGGCAAACACCGGCCGGTACACCTGCTCGGG TTTGGAGAGGGTCACACCCACGGTTTTCTGACCTCGCTGGCCCGCCCGGGTCGTACCGGGGCCGCCCGTTCGGGTCCGAT GGCCTTCGAGCGCTCCGGACGGGCGCCGGCCGACATCGACATCGCCTTGCTCTACGACGCCTTCGCCTCAAACCCGGCGA TGATCCTGGAGGAGGCGGGCTTCGTGAAGCCCGGCGGGGCAGGCGATTTCTACCGTGACGGCCGCGCCGATCCGGGGGGC GACCTTCCGGTGAACACCGACGGCGGCCTGATCCGGTTCGGGCACACCGGGACCTCCTCTGGCATTTCGCAGATCCTCGA GGGTTATTGGCAGTTGTCCGGTCGCGCCGAGGGCCGTCAGGTCTTCGGGGCGGACACCGCGTTCGTGCACAGCTACGGCT CGATGCTGTGCAGTCACGTCAGCATGGTGATGGAGGGAGCGTCATGA
Upstream 100 bases:
>100_bases GCGGGTGCGGGCCGGGGGTGACGCGGACCCCCTAGTCACGCTATGCTAACCGTCGTTCACGTCGGGACCGGCGTTGAACG CGTGGTCGGAAGGAGTCCGG
Downstream 100 bases:
>100_bases CCGCAGCTTCGAGTTCCCTCGACGGTCTGCACGATCCTGAGGCGCTGCCGCCGCTGACCGATGTCAACCGTCCCTACTTC GCAGCAGCGGCCCGCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPHDQPAIIGAAEVAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQM TCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIRDGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQ GKADIAEVTASQDRWAALNPAAIAHRSQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADIDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGRADPGG DLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVFGADTAFVHSYGSMLCSHVSMVMEGAS
Sequences:
>Translated_388_residues MPHDQPAIIGAAEVAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQM TCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIRDGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQ GKADIAEVTASQDRWAALNPAAIAHRSQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADIDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGRADPGG DLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVFGADTAFVHSYGSMLCSHVSMVMEGAS >Mature_387_residues PHDQPAIIGAAEVAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQMT CQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIRDGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQG KADIAEVTASQDRWAALNPAAIAHRSQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLGF GEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADIDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGRADPGGD LPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVFGADTAFVHSYGSMLCSHVSMVMEGAS
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=384, Percent_Identity=24.7395833333333, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI302344760, Length=245, Percent_Identity=24.8979591836735, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI302344767, Length=245, Percent_Identity=24.8979591836735, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI302344762, Length=245, Percent_Identity=24.8979591836735, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI19921506, Length=379, Percent_Identity=25.065963060686, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI24585051, Length=382, Percent_Identity=24.869109947644, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40724; Mature: 40592
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHDQPAIIGAAEVAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGS CCCCCCCEEEEHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC IFLSEDLMDYLGLHNLKLQMTCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIR EEEHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC DGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQGKADIAEVTASQDRWAALNP CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCH AAIAHRSQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG HHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCHHHCCCCCCCEEEEE FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADIDIALLYDAFASNPAMILEEAG CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEHHHCCCCEEEECCCC FVKPGGAGDFYRDGRADPGGDLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCE VFGADTAFVHSYGSMLCSHVSMVMEGAS EECCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PHDQPAIIGAAEVAPGRNVPYTSTELHVRAAVAALADAGVVPDEVDGLVCAGPMTNEGS CCCCCCEEEEHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC IFLSEDLMDYLGLHNLKLQMTCQLGGGTHLAMTRMASNVIARGEAETVLVVSAGKFPPIR EEEHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC DGGRELMALVCDHAFEMPYGPSVPALYGLIAQAWMHETGQGKADIAEVTASQDRWAALNP CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCH AAIAHRSQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARRARAGKHRPVHLLG HHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCHHHCCCCCCCEEEEE FGEGHTHGFLTSLARPGRTGAARSGPMAFERSGRAPADIDIALLYDAFASNPAMILEEAG CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEHHHCCCCEEEECCCC FVKPGGAGDFYRDGRADPGGDLPVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCE VFGADTAFVHSYGSMLCSHVSMVMEGAS EECCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]