| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is lip2 [H]
Identifier: 169629126
GI number: 169629126
Start: 2040547
End: 2041527
Strand: Direct
Name: lip2 [H]
Synonym: MAB_2039
Alternate gene names: 169629126
Gene position: 2040547-2041527 (Clockwise)
Preceding gene: 169629125
Following gene: 169629130
Centisome position: 40.27
GC content: 62.49
Gene sequence:
>981_bases GTGACCAGCCCCGTTGACCCGCTCCTGATGTCAGTCCTCGAGGCGAGCCCAGCGGTACAGCTCGATCGGCCCGAGGATTT GACCCTGGCACGTGAGTCCCGCCGCCACGCTGCCCCTAGCGATGCGCAGTTGCCCACGGTGGGTCGTGTGAAGGACACCT CGATTCCTGTCACCGATGCACCCCCTATTGCGGTGCGCATCTACTGGCCAGCGGGCTTTGAAAGCGCCGGAGAACTCCCA CTTGTCCTCTACTATCACGGCGGCGGTTTCGCGTTGGGCAGTATCGATACTCACGACTGGGTGGCACGGTCGATATGTGC ACATATCGAAGCGGTGGTGGTGTCGGTGGATTACCGACTCGCACCGGAAAACCCCTACCCAGCCGCTGTCGATGACGCAT TTGCCGCACTCAGCTGGGCGGCAGAACACGCCCCCGAATTGGGGGCGGACCCAGCCAGAATCGCCGTAGCTGGCGATTCT GCCGGTGGCAACCTCGCCACCGTGGCCGCTCAGCTGGCCGAAATCCGCGGCGGCCCACATCTTAAGTTTCAACTGCTCTG GTATCCGGGCACCACCAGCGATCTTTCCTTGCCGTCGGTCGTCGAGAATGCCGACGGTCCGGTCCTTTCCCGGGACATCA TGAGGATCTTTGGCCAGGCATATCTCGGTGAGCTATCGGAAACCGCTGACCCGACAGCATTACCGTTCACCGTTGCGCCG GTCAACGGGAAGCTCGATGGTCTGCCCCCCGCATATATCGCCACCGCGCAACACGACCCGCTTCGAGACGACGGCAAAAT CTACGCGACGCGACTGGCAGATGCGGGGGTGCCGGTCCAGCTTCGCAACGCCGACACTCTGGTCCACGGCTACCTTGATT TCGCCAGGATTGTTCCGGCCGCGAATGAGGAGTTTCGGCTTTCCCTCGACGCTTGTAAAACCGCGTTGCAGGCATCTCCT CGCCCGAAAGCCGGGCCCTGA
Upstream 100 bases:
>100_bases CTATTGGCATACATCAGCGGGCTGATGGGGCTTGGTTTCTTTTTGGCGCTGACCGTCCGCGACACAACATCCGAGGACAC CGAGTAGAAGGTAGGAAATC
Downstream 100 bases:
>100_bases GATCAGAATTCGAGCAAGTTCCACGTTGAGGCCGCAGCTGAGCAGGGTGGCTTGGCGGGTGCTGGGGAGGCCAGCCGGGG CAGGACATGCCGAGGTCCGT
Product: lipase LipH (carboxylesterase)
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTSPVDPLLMSVLEASPAVQLDRPEDLTLARESRRHAAPSDAQLPTVGRVKDTSIPVTDAPPIAVRIYWPAGFESAGELP LVLYYHGGGFALGSIDTHDWVARSICAHIEAVVVSVDYRLAPENPYPAAVDDAFAALSWAAEHAPELGADPARIAVAGDS AGGNLATVAAQLAEIRGGPHLKFQLLWYPGTTSDLSLPSVVENADGPVLSRDIMRIFGQAYLGELSETADPTALPFTVAP VNGKLDGLPPAYIATAQHDPLRDDGKIYATRLADAGVPVQLRNADTLVHGYLDFARIVPAANEEFRLSLDACKTALQASP RPKAGP
Sequences:
>Translated_326_residues MTSPVDPLLMSVLEASPAVQLDRPEDLTLARESRRHAAPSDAQLPTVGRVKDTSIPVTDAPPIAVRIYWPAGFESAGELP LVLYYHGGGFALGSIDTHDWVARSICAHIEAVVVSVDYRLAPENPYPAAVDDAFAALSWAAEHAPELGADPARIAVAGDS AGGNLATVAAQLAEIRGGPHLKFQLLWYPGTTSDLSLPSVVENADGPVLSRDIMRIFGQAYLGELSETADPTALPFTVAP VNGKLDGLPPAYIATAQHDPLRDDGKIYATRLADAGVPVQLRNADTLVHGYLDFARIVPAANEEFRLSLDACKTALQASP RPKAGP >Mature_325_residues TSPVDPLLMSVLEASPAVQLDRPEDLTLARESRRHAAPSDAQLPTVGRVKDTSIPVTDAPPIAVRIYWPAGFESAGELPL VLYYHGGGFALGSIDTHDWVARSICAHIEAVVVSVDYRLAPENPYPAAVDDAFAALSWAAEHAPELGADPARIAVAGDSA GGNLATVAAQLAEIRGGPHLKFQLLWYPGTTSDLSLPSVVENADGPVLSRDIMRIFGQAYLGELSETADPTALPFTVAPV NGKLDGLPPAYIATAQHDPLRDDGKIYATRLADAGVPVQLRNADTLVHGYLDFARIVPAANEEFRLSLDACKTALQASPR PKAGP
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=308, Percent_Identity=35.3896103896104, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI68299767, Length=306, Percent_Identity=32.0261437908497, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI21328446, Length=102, Percent_Identity=39.2156862745098, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI157041239, Length=133, Percent_Identity=35.3383458646617, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI68051721, Length=142, Percent_Identity=36.6197183098592, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI61966717, Length=172, Percent_Identity=32.5581395348837, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI226423947, Length=150, Percent_Identity=34, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1786682, Length=230, Percent_Identity=30.4347826086957, Blast_Score=112, Evalue=3e-26, Organism=Caenorhabditis elegans, GI72001146, Length=139, Percent_Identity=39.568345323741, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71996133, Length=127, Percent_Identity=37.7952755905512, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17540028, Length=127, Percent_Identity=37.007874015748, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17567059, Length=112, Percent_Identity=39.2857142857143, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533412, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115533410, Length=143, Percent_Identity=32.8671328671329, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24656084, Length=100, Percent_Identity=37, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24656076, Length=100, Percent_Identity=37, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI20130169, Length=100, Percent_Identity=37, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 34503; Mature: 34372
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPVDPLLMSVLEASPAVQLDRPEDLTLARESRRHAAPSDAQLPTVGRVKDTSIPVTDA CCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PPIAVRIYWPAGFESAGELPLVLYYHGGGFALGSIDTHDWVARSICAHIEAVVVSVDYRL CCEEEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHEEEEEEEEEEE APENPYPAAVDDAFAALSWAAEHAPELGADPARIAVAGDSAGGNLATVAAQLAEIRGGPH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LKFQLLWYPGTTSDLSLPSVVENADGPVLSRDIMRIFGQAYLGELSETADPTALPFTVAP EEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VNGKLDGLPPAYIATAQHDPLRDDGKIYATRLADAGVPVQLRNADTLVHGYLDFARIVPA CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCC ANEEFRLSLDACKTALQASPRPKAGP CCCCEEEEHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSPVDPLLMSVLEASPAVQLDRPEDLTLARESRRHAAPSDAQLPTVGRVKDTSIPVTDA CCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PPIAVRIYWPAGFESAGELPLVLYYHGGGFALGSIDTHDWVARSICAHIEAVVVSVDYRL CCEEEEEEECCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHEEEEEEEEEEE APENPYPAAVDDAFAALSWAAEHAPELGADPARIAVAGDSAGGNLATVAAQLAEIRGGPH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC LKFQLLWYPGTTSDLSLPSVVENADGPVLSRDIMRIFGQAYLGELSETADPTALPFTVAP EEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VNGKLDGLPPAYIATAQHDPLRDDGKIYATRLADAGVPVQLRNADTLVHGYLDFARIVPA CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCC ANEEFRLSLDACKTALQASPRPKAGP CCCCEEEEHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]