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The map label for this gene is 169629130

Identifier: 169629130

GI number: 169629130

Start: 2045302

End: 2045811

Strand: Direct

Name: 169629130

Synonym: MAB_2043

Alternate gene names: NA

Gene position: 2045302-2045811 (Clockwise)

Preceding gene: 169629126

Following gene: 169629131

Centisome position: 40.36

GC content: 64.9

Gene sequence:

>510_bases
ATGGAGGACATCGGCAGAACAGCGGGTGTGTCCAGGGCAACGGTGTATCGCTACTTCCCCAGTCGGGAGGCGGTGATGTC
GGGCGTCATCATTCGCGCCGCCGAGCGCTATCTCGACCGCATCAGCCCGCGGATCGCGGCGCACGCCGACCTGGGCTCCG
CGCTCGTCGACTTCGTGGAATACACGGTTGAGGCCGCGCGCCGCGAAGAGATCATCGGATTGTTGTTCGGCAGCGACGAG
GAACTAGCCGGCGTGGGTCTCGCGGCGGGGACCTCGACGTCCCTCTTCGAAATCGTCACCGAATTTCTGCGTCCCATCTT
CACCAGACACTGGAGTTGCGTGGAACCGGGGGTCTCCGTCGACGACGCCGCCGAGTGGGTTGTCCGCACGATACTGAGCC
TGCTGACTGTTCGAGGGCCGCGGGAGCGCAGTCGTGACGGACTCCGGGCGTTTCTGTCGAGGTTTCTCCTTCCGGCGATC
CTGGCGGGTGACCACGCTCGACCGATGTGA

Upstream 100 bases:

>100_bases
ATGGGGCGCCGCCGCGCCGACAGATCGTGGGTCCGCTCGCGACCGGTTGCTCGATGCTGCCGAGCGGTGCCTCGAGAGTT
GCGGTGTGGTGGGCACGACT

Downstream 100 bases:

>100_bases
CATCTATGGAGTAATGTCTCGACGGCAGATGAGGTAGGAGGGCCTGTGCAATTCACCACGTTCAACGAACAGGTCGCTGA
GCAACTCAAGAGCGCAGCAG

Product: putative transcriptional regulator, TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MEDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEYTVEAARREEIIGLLFGSDE
ELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSVDDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAI
LAGDHARPM

Sequences:

>Translated_169_residues
MEDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEYTVEAARREEIIGLLFGSDE
ELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSVDDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAI
LAGDHARPM
>Mature_169_residues
MEDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVEYTVEAARREEIIGLLFGSDE
ELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSVDDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAI
LAGDHARPM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18637; Mature: 18637

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVE
CCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
YTVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSV
HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM
HHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEDIGRTAGVSRATVYRYFPSREAVMSGVIIRAAERYLDRISPRIAAHADLGSALVDFVE
CCCCHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
YTVEAARREEIIGLLFGSDEELAGVGLAAGTSTSLFEIVTEFLRPIFTRHWSCVEPGVSV
HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH
DDAAEWVVRTILSLLTVRGPRERSRDGLRAFLSRFLLPAILAGDHARPM
HHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA