| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629109
Identifier: 169629109
GI number: 169629109
Start: 2019055
End: 2019681
Strand: Direct
Name: 169629109
Synonym: MAB_2022
Alternate gene names: NA
Gene position: 2019055-2019681 (Clockwise)
Preceding gene: 169629106
Following gene: 169629111
Centisome position: 39.85
GC content: 65.87
Gene sequence:
>627_bases GTGTCTAACGGAGGCTTGAAGGGAAGTGTGGCCGCGCCACGGGCGGACGTGGGCACGCGGCGGCGCGACGACGCGCTGAT GTCAGCCATCCGCGATGCGACGTACGCGGAGCTGCAGGACCACGGCTATGCCGGGGTCACTTTCGAGGGTGTGGCCCGCC GTGCCAAGACCAGCAAGCCGGTGCTGTACCGACGCTACCGATCTCGCGCGCACATGGTCGCCGACGCGCTGCCGACGCTG CGATATCCACCCACGCGGCTCGCATCGGCCACCTCTCTGCGTGAAGACGTGTTGGCACTGTTGGGGGCCTTACTCCGGGA GCTGCACCGGATCGGGGTCGGCAATTACCGCTGCCTATTGGCCGAGGCCGACGACGGGTTGGCCGACGATATGACGACGG CAATCGCCGGATGGGTCGATCAAACGGTCCTGAGGGCCCTGGCCGATGCCCGCGAGCGCGGCGAGATCGGTCCGGAGGAC ATCCCGTTGCCCGTTGCGACGAGCATCCTCGCGCTCATGCGTCACGAGCTGTTCTTCACCCGCAAGCCTTTTGGCGAGAG CAAGCTCGCGGAATTGTTCGACACCGTCTATCTGCCACTGATCAATCTGACATCGCGCGGCGGATAG
Upstream 100 bases:
>100_bases CATGGTTTCCCCTTCCTGGGCGGCCTGGCGGCAACAGTAATTCGTAAGAAACGGCCCGTATCTTGCGTGGTTCGATCGTA TCACGAGTAAGATACGCAAC
Downstream 100 bases:
>100_bases CGGGCGGAGATGAAACGCCGGCTATTTTTAGCCGCGCTTGATGAGTTCTCCGGTCGTTCGCAGAGGCCCGCCCTGCGATG ATGTCGTGTAGGAATGTCAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSNGGLKGSVAAPRADVGTRRRDDALMSAIRDATYAELQDHGYAGVTFEGVARRAKTSKPVLYRRYRSRAHMVADALPTL RYPPTRLASATSLREDVLALLGALLRELHRIGVGNYRCLLAEADDGLADDMTTAIAGWVDQTVLRALADARERGEIGPED IPLPVATSILALMRHELFFTRKPFGESKLAELFDTVYLPLINLTSRGG
Sequences:
>Translated_208_residues MSNGGLKGSVAAPRADVGTRRRDDALMSAIRDATYAELQDHGYAGVTFEGVARRAKTSKPVLYRRYRSRAHMVADALPTL RYPPTRLASATSLREDVLALLGALLRELHRIGVGNYRCLLAEADDGLADDMTTAIAGWVDQTVLRALADARERGEIGPED IPLPVATSILALMRHELFFTRKPFGESKLAELFDTVYLPLINLTSRGG >Mature_207_residues SNGGLKGSVAAPRADVGTRRRDDALMSAIRDATYAELQDHGYAGVTFEGVARRAKTSKPVLYRRYRSRAHMVADALPTLR YPPTRLASATSLREDVLALLGALLRELHRIGVGNYRCLLAEADDGLADDMTTAIAGWVDQTVLRALADARERGEIGPEDI PLPVATSILALMRHELFFTRKPFGESKLAELFDTVYLPLINLTSRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22736; Mature: 22605
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGGLKGSVAAPRADVGTRRRDDALMSAIRDATYAELQDHGYAGVTFEGVARRAKTSKP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC VLYRRYRSRAHMVADALPTLRYPPTRLASATSLREDVLALLGALLRELHRIGVGNYRCLL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE AEADDGLADDMTTAIAGWVDQTVLRALADARERGEIGPEDIPLPVATSILALMRHELFFT EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RKPFGESKLAELFDTVYLPLINLTSRGG CCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNGGLKGSVAAPRADVGTRRRDDALMSAIRDATYAELQDHGYAGVTFEGVARRAKTSKP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC VLYRRYRSRAHMVADALPTLRYPPTRLASATSLREDVLALLGALLRELHRIGVGNYRCLL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE AEADDGLADDMTTAIAGWVDQTVLRALADARERGEIGPEDIPLPVATSILALMRHELFFT EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RKPFGESKLAELFDTVYLPLINLTSRGG CCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA