Click here to switch to the map view.

The map label for this gene is 169629106

Identifier: 169629106

GI number: 169629106

Start: 2016791

End: 2017405

Strand: Direct

Name: 169629106

Synonym: MAB_2019

Alternate gene names: NA

Gene position: 2016791-2017405 (Clockwise)

Preceding gene: 169629105

Following gene: 169629109

Centisome position: 39.8

GC content: 65.53

Gene sequence:

>615_bases
TTGACGGCGAAGCCTCCGATGTCGCGTAGTGCAGTCCTGAGCCTGGCCGCCGTCGCGGCGCTCGCCCCATCTGCTTGCCA
TTCCGCGGATTCGGTCGCAGGGGACCGGCCGAATGCCACCATCGTCTTGGTGACGGCTCAGACGACGGTGCCCCCGCCGT
CCACCCCCAGCACGCTCGGCGAGGAGCCGGATGGGGGCGCTTTGTCGGCTCCGGTCAGCCCGTTCGATACTTCCTCTCTT
GCCGTCATCCGGTTGGATCCTTCGCTACTGCGCGCCGTCCAGGACGCTGCCAACAGTGCGGCGGCCGACGGGGTAACCCT
TCTGATCACGTCGGGCTGGCGTTCCCGGGCTTTTCAGCAGCAGTTGCTCGACGATGCGGTACAGACGTATGGAAGCCTGG
CGGTCGCCCGGCAGTGGGTGGCCACCCCGGATGAGTCGCATCATGTGTCGGGCAAGGCTGTCGACATAGGTCCGGCAGCC
GCGTATGGCTGGATGTTGGCGCACAGCACGCAATTCGGCTTGTGCCAGGTCTTTGCCAACGAGAAGTGGCACTACGAACT
CACCGCGGATGCCGAGGGGCAATGTCCACCGTTGCGTACCAACGCAGCAGGCTAG

Upstream 100 bases:

>100_bases
TCAAGGAGGCCGCGACGGCCGCTCATCACCATCCGTCTGCCGAAGAAACGTACGAGCAGTTCGATATCGATGATGAGGAC
GAAGACGAGCCGCACCGGCC

Downstream 100 bases:

>100_bases
CCAGACACGCTTCTACTTCGGGCCGGCGGCGGCCTTGGCGAGCTGACCTGAGATGGATTCGAGTGCCTGGGTGAGGCTTT
GGAAGGGGATCTCGGGGTTG

Product: putative VanY-type carboxypeptidase

Products: NA

Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase; VanY-Type Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase Family Protein; M15 Family Peptidase

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTAKPPMSRSAVLSLAAVAALAPSACHSADSVAGDRPNATIVLVTAQTTVPPPSTPSTLGEEPDGGALSAPVSPFDTSSL
AVIRLDPSLLRAVQDAANSAAADGVTLLITSGWRSRAFQQQLLDDAVQTYGSLAVARQWVATPDESHHVSGKAVDIGPAA
AYGWMLAHSTQFGLCQVFANEKWHYELTADAEGQCPPLRTNAAG

Sequences:

>Translated_204_residues
MTAKPPMSRSAVLSLAAVAALAPSACHSADSVAGDRPNATIVLVTAQTTVPPPSTPSTLGEEPDGGALSAPVSPFDTSSL
AVIRLDPSLLRAVQDAANSAAADGVTLLITSGWRSRAFQQQLLDDAVQTYGSLAVARQWVATPDESHHVSGKAVDIGPAA
AYGWMLAHSTQFGLCQVFANEKWHYELTADAEGQCPPLRTNAAG
>Mature_203_residues
TAKPPMSRSAVLSLAAVAALAPSACHSADSVAGDRPNATIVLVTAQTTVPPPSTPSTLGEEPDGGALSAPVSPFDTSSLA
VIRLDPSLLRAVQDAANSAAADGVTLLITSGWRSRAFQQQLLDDAVQTYGSLAVARQWVATPDESHHVSGKAVDIGPAAA
YGWMLAHSTQFGLCQVFANEKWHYELTADAEGQCPPLRTNAAG

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21059; Mature: 20927

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKPPMSRSAVLSLAAVAALAPSACHSADSVAGDRPNATIVLVTAQTTVPPPSTPSTLG
CCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCC
EEPDGGALSAPVSPFDTSSLAVIRLDPSLLRAVQDAANSAAADGVTLLITSGWRSRAFQQ
CCCCCCEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHH
QLLDDAVQTYGSLAVARQWVATPDESHHVSGKAVDIGPAAAYGWMLAHSTQFGLCQVFAN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEECC
EKWHYELTADAEGQCPPLRTNAAG
CCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAKPPMSRSAVLSLAAVAALAPSACHSADSVAGDRPNATIVLVTAQTTVPPPSTPSTLG
CCCCCCCHHHHHHHHHHHHHCCHHHCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCC
EEPDGGALSAPVSPFDTSSLAVIRLDPSLLRAVQDAANSAAADGVTLLITSGWRSRAFQQ
CCCCCCEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHH
QLLDDAVQTYGSLAVARQWVATPDESHHVSGKAVDIGPAAAYGWMLAHSTQFGLCQVFAN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEECC
EKWHYELTADAEGQCPPLRTNAAG
CCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA