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The map label for this gene is ctaC [H]

Identifier: 169629048

GI number: 169629048

Start: 1959719

End: 1960768

Strand: Direct

Name: ctaC [H]

Synonym: MAB_1961

Alternate gene names: 169629048

Gene position: 1959719-1960768 (Clockwise)

Preceding gene: 169629046

Following gene: 169629049

Centisome position: 38.67

GC content: 63.71

Gene sequence:

>1050_bases
GTGACGTCACGGTCCGGCTCACGGCCGTCCCTGCTGGCCACTGTGGTGCTGTTGGGCGCGGCGAGCTTCCTGCTCAGCGG
TTGTAGCGTCCAAGAGGTGCTGCGGTTCGGCTGGCCCGAGGGCATCACCCCCGAAGCACACGACTACATGGCCCCCTTGT
GGACCTGGGCGGTCGTCGCCTCGCTGGTCGTCGGCGTCATCGTGTGGGGTCTGACCTTCTGGACCGTCGCGTTCCACCGC
CACAAGCCGGGCGACACCGAGTTCCCGCGTCAGTTCGGGTACAACCTGCCGCTGGAGCTGGTCCTGACGGTGGTGCCCTT
CTTGATCATCGCGGTGCTCTTCTACTTCACCGTCGTGGTGCAGAACAAGGTCATGCACAAGGACCCCAACCCCGAGGTCG
TCGTCGACGTCACCGCATTCCAGTGGAACTGGAAGTTCGGCTACCAGAAGGTCGCGTTCAAGGACGGAAGCCTCAACTAC
GAAGGCGCCGACCCCGAGCGCAAGAAGGCCATGACCTCCAAGCCCGAGGGCAAGGACGCACACGGCAACGAGCTCGTCGG
CCCGGTGCGTGGCCTGAACCGTGAGGACCGCACCTACCTGAACTTCGACAAGATCGAGACGGTCGGAACCTCTTCGGAGA
TCCCGGTGCTGGTCGTGCCCAGCGGCAAGAGCATCGAGTTCCAGCTGGCCTCGGCCGACGTCATCCACTCGTTCCGGGTG
GTGCCGTTCCTGTTCACTCGCGACGTGATGCCCGAGCCCAAGGCCAACAACTCCGACAACGTCTTTCAGGTCAGCAAGAT
CCTGAAGGAGGGCGCGTTCGTGGGGCGCTGCGTGGAGATGTGCGGCACGTACCACTCGATGATGGCCTTCGAGCTGCGCG
TGGTCAGCCCCAATGACTTCAAGTTCTATCTGAAGGCGCGTCAGGACGGTAAGAGCAACGCGGAGGCACTGGCCTCGATC
GGTCAGTCACCCGTCTCGATCACCACCAGGCCGTTCGATGGTCGTCGCGGCGATCTCGCGCCGGTAGACAACAACGCGGC
CAAGAACTAG

Upstream 100 bases:

>100_bases
GTCGCAGCCCTGATGCGACCGCGTGGTCTACGCTGCGTAGTATTCGATTGCTGCCACTGGTCAGCGATGGATTCTGCAGG
CGAAACAGGAGGCTAAAAAC

Downstream 100 bases:

>100_bases
GCGAGGGAGCGCAGCATGCATATCGAAGCCCGACTCTTCGAGATCCTCACCGGATTCTTCGCCCTGGCCACCGTGGTGTA
CGCGGTGCTGACCGCCATGT

Product: cytochrome c oxidase subunit 2 precursor

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTSRSGSRPSLLATVVLLGAASFLLSGCSVQEVLRFGWPEGITPEAHDYMAPLWTWAVVASLVVGVIVWGLTFWTVAFHR
HKPGDTEFPRQFGYNLPLELVLTVVPFLIIAVLFYFTVVVQNKVMHKDPNPEVVVDVTAFQWNWKFGYQKVAFKDGSLNY
EGADPERKKAMTSKPEGKDAHGNELVGPVRGLNREDRTYLNFDKIETVGTSSEIPVLVVPSGKSIEFQLASADVIHSFRV
VPFLFTRDVMPEPKANNSDNVFQVSKILKEGAFVGRCVEMCGTYHSMMAFELRVVSPNDFKFYLKARQDGKSNAEALASI
GQSPVSITTRPFDGRRGDLAPVDNNAAKN

Sequences:

>Translated_349_residues
MTSRSGSRPSLLATVVLLGAASFLLSGCSVQEVLRFGWPEGITPEAHDYMAPLWTWAVVASLVVGVIVWGLTFWTVAFHR
HKPGDTEFPRQFGYNLPLELVLTVVPFLIIAVLFYFTVVVQNKVMHKDPNPEVVVDVTAFQWNWKFGYQKVAFKDGSLNY
EGADPERKKAMTSKPEGKDAHGNELVGPVRGLNREDRTYLNFDKIETVGTSSEIPVLVVPSGKSIEFQLASADVIHSFRV
VPFLFTRDVMPEPKANNSDNVFQVSKILKEGAFVGRCVEMCGTYHSMMAFELRVVSPNDFKFYLKARQDGKSNAEALASI
GQSPVSITTRPFDGRRGDLAPVDNNAAKN
>Mature_348_residues
TSRSGSRPSLLATVVLLGAASFLLSGCSVQEVLRFGWPEGITPEAHDYMAPLWTWAVVASLVVGVIVWGLTFWTVAFHRH
KPGDTEFPRQFGYNLPLELVLTVVPFLIIAVLFYFTVVVQNKVMHKDPNPEVVVDVTAFQWNWKFGYQKVAFKDGSLNYE
GADPERKKAMTSKPEGKDAHGNELVGPVRGLNREDRTYLNFDKIETVGTSSEIPVLVVPSGKSIEFQLASADVIHSFRVV
PFLFTRDVMPEPKANNSDNVFQVSKILKEGAFVGRCVEMCGTYHSMMAFELRVVSPNDFKFYLKARQDGKSNAEALASIG
QSPVSITTRPFDGRRGDLAPVDNNAAKN

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 38708; Mature: 38577

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRSGSRPSLLATVVLLGAASFLLSGCSVQEVLRFGWPEGITPEAHDYMAPLWTWAVVA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SLVVGVIVWGLTFWTVAFHRHKPGDTEFPRQFGYNLPLELVLTVVPFLIIAVLFYFTVVV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QNKVMHKDPNPEVVVDVTAFQWNWKFGYQKVAFKDGSLNYEGADPERKKAMTSKPEGKDA
HHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCC
HGNELVGPVRGLNREDRTYLNFDKIETVGTSSEIPVLVVPSGKSIEFQLASADVIHSFRV
CCCCCCHHHHCCCCCCCEEECHHHHHCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHH
VPFLFTRDVMPEPKANNSDNVFQVSKILKEGAFVGRCVEMCGTYHSMMAFELRVVSPNDF
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEEECCCCE
KFYLKARQDGKSNAEALASIGQSPVSITTRPFDGRRGDLAPVDNNAAKN
EEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSRSGSRPSLLATVVLLGAASFLLSGCSVQEVLRFGWPEGITPEAHDYMAPLWTWAVVA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SLVVGVIVWGLTFWTVAFHRHKPGDTEFPRQFGYNLPLELVLTVVPFLIIAVLFYFTVVV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QNKVMHKDPNPEVVVDVTAFQWNWKFGYQKVAFKDGSLNYEGADPERKKAMTSKPEGKDA
HHHHHCCCCCCCEEEEEEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCC
HGNELVGPVRGLNREDRTYLNFDKIETVGTSSEIPVLVVPSGKSIEFQLASADVIHSFRV
CCCCCCHHHHCCCCCCCEEECHHHHHCCCCCCCCCEEEECCCCCEEEEECCHHHHHHHHH
VPFLFTRDVMPEPKANNSDNVFQVSKILKEGAFVGRCVEMCGTYHSMMAFELRVVSPNDF
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEEEECCCCE
KFYLKARQDGKSNAEALASIGQSPVSITTRPFDGRRGDLAPVDNNAAKN
EEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]