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The map label for this gene is ctaF [H]

Identifier: 169629049

GI number: 169629049

Start: 1960784

End: 1961203

Strand: Direct

Name: ctaF [H]

Synonym: MAB_1962

Alternate gene names: 169629049

Gene position: 1960784-1961203 (Clockwise)

Preceding gene: 169629048

Following gene: 169629050

Centisome position: 38.7

GC content: 66.9

Gene sequence:

>420_bases
ATGCATATCGAAGCCCGACTCTTCGAGATCCTCACCGGATTCTTCGCCCTGGCCACCGTGGTGTACGCGGTGCTGACCGC
CATGTACGCCAACGGCGGCGTGGAGTGGGCCGGTACCACCGCCATGGTGATGACCACGGGTCTGTCGCTGATCATCTCCA
CGTTCTTCCGGTTCGTGGCCCGTCGTCTGGACACCCGTCCCGAGGACTACGAGGACGCCGAGATCGCCGATGGCGCCGGA
GAGCTCGGCTTCTACAGCCCGCACAGCTGGTGGCCGATCATGATCGCGCTGGCCGCCGCCACCACTGCCGTGGGCGTGGC
GCTGTGGCTGCCGTGGCTGCTCGCCGCCGGTGCGGTGTTTGTGCTCAGCGCGGTCGCCGGCCTGGTCTTCGAGTACCACA
TCGGCGCGGAGAAGCACTAG

Upstream 100 bases:

>100_bases
GTCACCCGTCTCGATCACCACCAGGCCGTTCGATGGTCGTCGCGGCGATCTCGCGCCGGTAGACAACAACGCGGCCAAGA
ACTAGGCGAGGGAGCGCAGC

Downstream 100 bases:

>100_bases
CTCATCTCGCATTTTGCCCGTCAGCCATGGCCGCTCCCGTACTTTGCGGTGGGACGGCCGTGGCTGGTGGGACATTGCCG
TGCGCACCATCACGTTTTCG

Product: cytochrome c oxidase polypeptide 4

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MHIEARLFEILTGFFALATVVYAVLTAMYANGGVEWAGTTAMVMTTGLSLIISTFFRFVARRLDTRPEDYEDAEIADGAG
ELGFYSPHSWWPIMIALAAATTAVGVALWLPWLLAAGAVFVLSAVAGLVFEYHIGAEKH

Sequences:

>Translated_139_residues
MHIEARLFEILTGFFALATVVYAVLTAMYANGGVEWAGTTAMVMTTGLSLIISTFFRFVARRLDTRPEDYEDAEIADGAG
ELGFYSPHSWWPIMIALAAATTAVGVALWLPWLLAAGAVFVLSAVAGLVFEYHIGAEKH
>Mature_139_residues
MHIEARLFEILTGFFALATVVYAVLTAMYANGGVEWAGTTAMVMTTGLSLIISTFFRFVARRLDTRPEDYEDAEIADGAG
ELGFYSPHSWWPIMIALAAATTAVGVALWLPWLLAAGAVFVLSAVAGLVFEYHIGAEKH

Specific function: Part of cytochrome c oxidase, its function is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021050 [H]

Pfam domain/function: PF12270 Cyt_c_ox_IV [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 15059; Mature: 15059

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIEARLFEILTGFFALATVVYAVLTAMYANGGVEWAGTTAMVMTTGLSLIISTFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRLDTRPEDYEDAEIADGAGELGFYSPHSWWPIMIALAAATTAVGVALWLPWLLAAGAVF
HHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSAVAGLVFEYHIGAEKH
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHIEARLFEILTGFFALATVVYAVLTAMYANGGVEWAGTTAMVMTTGLSLIISTFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRLDTRPEDYEDAEIADGAGELGFYSPHSWWPIMIALAAATTAVGVALWLPWLLAAGAVF
HHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSAVAGLVFEYHIGAEKH
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA