| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628995
Identifier: 169628995
GI number: 169628995
Start: 1904060
End: 1905256
Strand: Direct
Name: 169628995
Synonym: MAB_1907
Alternate gene names: NA
Gene position: 1904060-1905256 (Clockwise)
Preceding gene: 169628994
Following gene: 169629001
Centisome position: 37.58
GC content: 67.42
Gene sequence:
>1197_bases GTGTTACCGCTCGATCCGGCTACCCGCGCCGCCCAACTCGTCGACCGAATCGCCGAATTGGAGCGCGTCAAGGCTGCCGC GGCGGCGGAGCAGGCTCATGCCGCGGTGTTGTTGGACAGGGCACGCCGCGAAGAAGAGGCGGCCAATGGTGTGCCCCGGC GGCGGCAGGGGGCGGGCGTCGCAACAGAGATCGCCCTGGCGCGGCAGGATTCACCGGCGCGGGGCAGCCGTCACCTCGGC TTCGCCAAAGCACTGGTGAACGAGATGCCGCACACCCTTGCCGCACTGGAGTGCGGCGCGCTCAGCGAATGGCGCGCGAC GATCCTGGTACGGGAGACCGCCTATCTCGCGGTCGAGGATAGGCAGAAGATCGATGTCGAGATGTGCGCCGAGACCTCGC GGCTTCGGGGATTGGGTGATACCCGGCTGGCCGCGGAGGCGAAGCGTCTGGCGTATCGGCTGGATGCCCAGGCTGTGGTG CGCCGGGCCCGCCGGGCGGAAAGCGAACGCAGGGTTTCTCTCCGTCCCGCACCCGACACCATGACGTATCTGACGGCGTT GCTGCCGGTCAAACAGGGTGTGGCCGTGTATGCCGCGCTCAAACGCACCGCCGACGCGTCGATGGATCCTGTTCGCGGCC AAGGGCAGATCATGGCCGACACCCTCGTGGAGCGCGTGACCGGAGTATCAGCTGCCGCCGCGGTTCCTGTCGGGGTGAAC ATCACCGTCTCGGATGAGGCGTTGTTGGGCGGAGGCGACGAGCCTGCCACGATCACCGGCCACGGGCTAGTTCCGGCTGC CGTCGCGCGGCGGCTCATCTCGGAAGCCGTCAGTGCCGAAGCTAAAGTTCTTGTGCGGCGGCTGTACCGGCGCTGTACCA CCGGTGCACTGGTCAAGGCCGAGTCGCGAAGCCGATTGTTCCCCAGGGGATTGGCCGAGCTGATCGATCTGCGCGATCAG ACCTGCCGGACGCCGTACTGCGATGCCCCAATCCGGCACCATGACCATGTGGTGGGCAGTATGCGCGGAGGTCCGACGGC CCTCGACAACGGGCAAGGCCTCTGCGAGCGATGCAATTACGTCAAGGAGACGGCGGGCTGGAACGTGGCTCCGGTGCCCG GCGCCGATCGGCATACCGTCGAGTTCACCACGCCGACGGGAACAGCCTATCGCTCGACGGCACCGCCATTGCCCTGA
Upstream 100 bases:
>100_bases GATCGGCAAGATTGTGGATAACGTGGATGTCGATCGAACGGTTGTGGATAACAACAGAAGTCGCAATATATCGAACTGAT GTTCGGCTAACGTCAGGGGT
Downstream 100 bases:
>100_bases GTGAAGGGCCGAAGGGCCAGAACATAAATGACGATCACAGCGACCGGAACGGTCAACGGTAACCAGGATGATCGTCCCAT GGGTATCGCCGCCGCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Endonuclease; HNH Endonuclease Domain-Containing Protein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MLPLDPATRAAQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGVATEIALARQDSPARGSRHLG FAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVEDRQKIDVEMCAETSRLRGLGDTRLAAEAKRLAYRLDAQAVV RRARRAESERRVSLRPAPDTMTYLTALLPVKQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVN ITVSDEALLGGGDEPATITGHGLVPAAVARRLISEAVSAEAKVLVRRLYRRCTTGALVKAESRSRLFPRGLAELIDLRDQ TCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNYVKETAGWNVAPVPGADRHTVEFTTPTGTAYRSTAPPLP
Sequences:
>Translated_398_residues MLPLDPATRAAQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGVATEIALARQDSPARGSRHLG FAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVEDRQKIDVEMCAETSRLRGLGDTRLAAEAKRLAYRLDAQAVV RRARRAESERRVSLRPAPDTMTYLTALLPVKQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVN ITVSDEALLGGGDEPATITGHGLVPAAVARRLISEAVSAEAKVLVRRLYRRCTTGALVKAESRSRLFPRGLAELIDLRDQ TCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNYVKETAGWNVAPVPGADRHTVEFTTPTGTAYRSTAPPLP >Mature_398_residues MLPLDPATRAAQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGVATEIALARQDSPARGSRHLG FAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVEDRQKIDVEMCAETSRLRGLGDTRLAAEAKRLAYRLDAQAVV RRARRAESERRVSLRPAPDTMTYLTALLPVKQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVN ITVSDEALLGGGDEPATITGHGLVPAAVARRLISEAVSAEAKVLVRRLYRRCTTGALVKAESRSRLFPRGLAELIDLRDQ TCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNYVKETAGWNVAPVPGADRHTVEFTTPTGTAYRSTAPPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42743; Mature: 42743
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLDPATRAAQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH ATEIALARQDSPARGSRHLGFAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVED HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHEEEEEEEEEEEEECC RQKIDVEMCAETSRLRGLGDTRLAAEAKRLAYRLDAQAVVRRARRAESERRVSLRPAPDT CHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEECCCCCHH MTYLTALLPVKQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVN HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCEE ITVSDEALLGGGDEPATITGHGLVPAAVARRLISEAVSAEAKVLVRRLYRRCTTGALVKA EEECCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC ESRSRLFPRGLAELIDLRDQTCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH VKETAGWNVAPVPGADRHTVEFTTPTGTAYRSTAPPLP HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLPLDPATRAAQLVDRIAELERVKAAAAAEQAHAAVLLDRARREEEAANGVPRRRQGAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH ATEIALARQDSPARGSRHLGFAKALVNEMPHTLAALECGALSEWRATILVRETAYLAVED HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHEEEEEEEEEEEEECC RQKIDVEMCAETSRLRGLGDTRLAAEAKRLAYRLDAQAVVRRARRAESERRVSLRPAPDT CHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEECCCCCHH MTYLTALLPVKQGVAVYAALKRTADASMDPVRGQGQIMADTLVERVTGVSAAAAVPVGVN HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCEE ITVSDEALLGGGDEPATITGHGLVPAAVARRLISEAVSAEAKVLVRRLYRRCTTGALVKA EEECCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC ESRSRLFPRGLAELIDLRDQTCRTPYCDAPIRHHDHVVGSMRGGPTALDNGQGLCERCNY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH VKETAGWNVAPVPGADRHTVEFTTPTGTAYRSTAPPLP HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA