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The map label for this gene is 169628961

Identifier: 169628961

GI number: 169628961

Start: 1871499

End: 1872086

Strand: Reverse

Name: 169628961

Synonym: MAB_1873c

Alternate gene names: NA

Gene position: 1872086-1871499 (Counterclockwise)

Preceding gene: 169628963

Following gene: 169628960

Centisome position: 36.95

GC content: 68.88

Gene sequence:

>588_bases
TTGTCCGAGGCTGAGCTGCGCACGCCGCGGGCGGACGCGGCCCGGAACCGCGACCAACTGCTCGCGGCGGCGACCCGAGC
GTTCGCGTCCGCCGACTCCGAGCCGTCGATGCGTGCCATCGCCCGTCAGGCCGGGGTCGGCATCGCCACGCTCTACCGGC
ACTTCCCTACCCGCGAGTCGCTGGTGGACGCGGTCTACCGGGACCAGGTGGTGCGATTGACCACGGGCGCCCACGAGCTG
CTCGGGCAGCTACCTCCGGCCACGGCAATGCGGCGTTGGATGGACTCGTTCGGGGACTGGATCGCGACCAAGAACGGCAT
GCTCGACACACTGCACACGATGATCGAATCCGGCCACATTGGCCACGCCGAGACCCGGGCCGAACTACTTAAGGCCGTCA
CCACCATCCTCGATGCCGGTCACGCGGCGGGCGACCTCCGCGCCGATGTCACGGCCGAAGACATCGCCGCCTCCCTCATC
GGTATCTTCACCGTGGCCCCCCGGCCCGAGCAGGAAGCCCAGGCCGATCGCCTACTGAATCTCTTGATGGACGGACTCCG
ACCCGCCGCCCGGCAAGCCCATTCCTAA

Upstream 100 bases:

>100_bases
CCCGCATATGCGCCGCCTCCTTGGGATCGAAGAAACGTAGATAAACGGACTATGCTCCGTTTACATGAGCGACCGTAACA
TAAACGGAGCGTGATCCGCT

Downstream 100 bases:

>100_bases
CCAGGCCCGTACTGTTAGAGTGACGCTTCATTCACATAATTGACAAGGGAGTCTGGGGAATGGCACTTCGGCGCAAGAAA
GCACTCAAGTTGCTCGTCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcription Regulator Protein; TetR-Type Regulator; TetR Family Protein Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; TetR Family Transcriptional Regulatory Protein; Regulatory Protein; TetR/AcrR-Family Transcriptional Regulator; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSEAELRTPRADAARNRDQLLAAATRAFASADSEPSMRAIARQAGVGIATLYRHFPTRESLVDAVYRDQVVRLTTGAHEL
LGQLPPATAMRRWMDSFGDWIATKNGMLDTLHTMIESGHIGHAETRAELLKAVTTILDAGHAAGDLRADVTAEDIAASLI
GIFTVAPRPEQEAQADRLLNLLMDGLRPAARQAHS

Sequences:

>Translated_195_residues
MSEAELRTPRADAARNRDQLLAAATRAFASADSEPSMRAIARQAGVGIATLYRHFPTRESLVDAVYRDQVVRLTTGAHEL
LGQLPPATAMRRWMDSFGDWIATKNGMLDTLHTMIESGHIGHAETRAELLKAVTTILDAGHAAGDLRADVTAEDIAASLI
GIFTVAPRPEQEAQADRLLNLLMDGLRPAARQAHS
>Mature_194_residues
SEAELRTPRADAARNRDQLLAAATRAFASADSEPSMRAIARQAGVGIATLYRHFPTRESLVDAVYRDQVVRLTTGAHELL
GQLPPATAMRRWMDSFGDWIATKNGMLDTLHTMIESGHIGHAETRAELLKAVTTILDAGHAAGDLRADVTAEDIAASLIG
IFTVAPRPEQEAQADRLLNLLMDGLRPAARQAHS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21116; Mature: 20985

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAELRTPRADAARNRDQLLAAATRAFASADSEPSMRAIARQAGVGIATLYRHFPTRES
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHH
LVDAVYRDQVVRLTTGAHELLGQLPPATAMRRWMDSFGDWIATKNGMLDTLHTMIESGHI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
GHAETRAELLKAVTTILDAGHAAGDLRADVTAEDIAASLIGIFTVAPRPEQEAQADRLLN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLMDGLRPAARQAHS
HHHHHCCHHHHHCCC
>Mature Secondary Structure 
SEAELRTPRADAARNRDQLLAAATRAFASADSEPSMRAIARQAGVGIATLYRHFPTRES
CCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHH
LVDAVYRDQVVRLTTGAHELLGQLPPATAMRRWMDSFGDWIATKNGMLDTLHTMIESGHI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
GHAETRAELLKAVTTILDAGHAAGDLRADVTAEDIAASLIGIFTVAPRPEQEAQADRLLN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LLMDGLRPAARQAHS
HHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA