| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628960
Identifier: 169628960
GI number: 169628960
Start: 1871053
End: 1871439
Strand: Reverse
Name: 169628960
Synonym: MAB_1872c
Alternate gene names: NA
Gene position: 1871439-1871053 (Counterclockwise)
Preceding gene: 169628961
Following gene: 169628957
Centisome position: 36.93
GC content: 65.12
Gene sequence:
>387_bases ATGGCACTTCGGCGCAAGAAAGCACTCAAGTTGCTCGTCGACGGTCAGCCGACCGCAACGCTCGTGACGACGAAGGTCGG CCCGAGTCTTTTCGAGCGACTTTCGGTCCTCATCGCGAATCTGATCCGCATCGGATTCCGCGCGGGCGGCGCGGGTCTGG CAGCCACCGGCGTGGCGCATTTCGTCGCGCCCCAGCCGTTCGAGTCCATCTCCAAGGTCGCCTTCCCGGAGGACACACGC CGCTGGGTGTACCAAAACGGTTTCACCGAGCTCCTGCTCGGCTTGGCCCTGGCATTCCGGCGCACCCGCATCGTGGGCAG CCTCGGCGGCCTGGCCTACGTCGCTTTCCTGGTGAGCCGCTTGGTCGGTAACGCCAGCAAGAGCTAA
Upstream 100 bases:
>100_bases TGGACGGACTCCGACCCGCCGCCCGGCAAGCCCATTCCTAACCAGGCCCGTACTGTTAGAGTGACGCTTCATTCACATAA TTGACAAGGGAGTCTGGGGA
Downstream 100 bases:
>100_bases GGCTCTTAACCGACTCCGCGCAGCCAGGTCACCTCGGCGCCGTCGCCGCCACTGCGGTACGGCTCCAGCGCGTCATCCCA TGCGGTACCCAGCATGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MALRRKKALKLLVDGQPTATLVTTKVGPSLFERLSVLIANLIRIGFRAGGAGLAATGVAHFVAPQPFESISKVAFPEDTR RWVYQNGFTELLLGLALAFRRTRIVGSLGGLAYVAFLVSRLVGNASKS
Sequences:
>Translated_128_residues MALRRKKALKLLVDGQPTATLVTTKVGPSLFERLSVLIANLIRIGFRAGGAGLAATGVAHFVAPQPFESISKVAFPEDTR RWVYQNGFTELLLGLALAFRRTRIVGSLGGLAYVAFLVSRLVGNASKS >Mature_127_residues ALRRKKALKLLVDGQPTATLVTTKVGPSLFERLSVLIANLIRIGFRAGGAGLAATGVAHFVAPQPFESISKVAFPEDTRR WVYQNGFTELLLGLALAFRRTRIVGSLGGLAYVAFLVSRLVGNASKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13712; Mature: 13581
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRRKKALKLLVDGQPTATLVTTKVGPSLFERLSVLIANLIRIGFRAGGAGLAATGVAH CCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FVAPQPFESISKVAFPEDTRRWVYQNGFTELLLGLALAFRRTRIVGSLGGLAYVAFLVSR HCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGNASKS HHCCCCCC >Mature Secondary Structure ALRRKKALKLLVDGQPTATLVTTKVGPSLFERLSVLIANLIRIGFRAGGAGLAATGVAH CCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH FVAPQPFESISKVAFPEDTRRWVYQNGFTELLLGLALAFRRTRIVGSLGGLAYVAFLVSR HCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGNASKS HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA