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The map label for this gene is ubiF [C]

Identifier: 169628736

GI number: 169628736

Start: 1675951

End: 1677204

Strand: Reverse

Name: ubiF [C]

Synonym: MAB_1646c

Alternate gene names: 169628736

Gene position: 1677204-1675951 (Counterclockwise)

Preceding gene: 169628737

Following gene: 169628729

Centisome position: 33.1

GC content: 65.95

Gene sequence:

>1254_bases
ATGATCAAACCTGAACTGCCACAGGGCACCACATGTGCCATCGCCGGTGGCGGGCCCGCCGGAATGATGCTGGCGTTGCT
GTTGGCGCGTGCCGGTATCGACGTCACCGTGCTAGAGAAGCACCCCGACTTCCTGCGAGACTTCCGCGGTGACACGGTGC
ACGCCAGCACGCTGAACCTGATCGACGAGTTGGGGCTGGGTCCCAGGTTCGCGGCCATGCCGCACAATCTGGTGGAGCAG
GTCACGGTGGACCTGGGCGAACAGACATTCCGGTTGGGCGATCTGAACCGGCTGCCCGGACCGCACAAACACATCGCGAT
GGCGCCGCAATGGGACTTCCTGGAAATGCTGGCCACTGCCGCGGAAACCGAGCCCACTTTCCGTCTGCGGCGCAGCACAG
AGGTCACCGGCCTACTGCGCTCGGGCGACCGCATCACCGGAATCGAATACCGCACCGCCTCAGGCGAAACCGGCGCGCTC
AAGGCCGATCTCACCGTCGCCTGCGACGGCCGCGGCTCGGCGCTGCGCGCCGCGGCCGGGATGCGTCCACGGCAGTTCGG
CGTGCCGATCGACATTTGGTGGTTCCGCCTCCCCAAGCATCCCGATGATCCGCAGGGACCGCGCGCGCGGGTCGGTGCCA
ACCGGTTCATGGTGCTACTGGACCGCGGAGACTACTTCCAATGCGGGTACCTCATCGGCAAGGGCACCGACTCGCAGATG
CGCAGCGGCGATGTACAGGTGCTGCGCGACCGGGTCGCCGAAATGGCGCCATGGCTGGCCGCCCGCACGAACGCCATCGC
CAGTTGGGACGACGTGAAACTGCTTGATATACAACTTAATAGGCTACGCAAGTGGTACCGCGACGGCTTGCTGTTCATCG
GCGATGCCGCGCACGCGATGTCCCCGGTGGGCGGAGTCGGCATCAATTTAGCGATCGCCGACGCGGTCGCCACCGCGCGC
ATCCTGGCCGAGCCGCTACGCACAGGCACATTGACAACAGCCGACCTCCGCAAGGTTCAGCTGCGCCGGTGGGTACCGAC
CGCCCTCATCCAGCGCATACAGCGGGCCGTGCACCGGCGGGTGTTCTCCGCGGTGGACTCGTCCACCACGGCCGCCTCGA
ACGCCAAGATCGCGTCGGTCTTGTCCATCGCCACCAAATATCCATGGCTACAAGCTGTTCCCGCCTACGGCGTGGCGATC
GGGCCACTGCCCGAGCACGCACCCGATTTCGCCCGCCGCTCCCCTATTGACTGA

Upstream 100 bases:

>100_bases
CTGTCCCAGCCGGGGCCACCCCTGGCGCTGAGTTGGACGATCTCGTTGATTCCGCTGTTCGCGCTGATCGGTGTCCTTAT
CGTGGCGTGGAGGAGGACCC

Downstream 100 bases:

>100_bases
GGACGGGCACCATGGCGGGGACCACCTGATCACGAATCTTCGCCCACGGCACCGTGACCGGCACATAGTCTCCGGCGGCG
TGCGGAACGGAGATATAGAA

Product: hypothetical protein

Products: 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MIKPELPQGTTCAIAGGGPAGMMLALLLARAGIDVTVLEKHPDFLRDFRGDTVHASTLNLIDELGLGPRFAAMPHNLVEQ
VTVDLGEQTFRLGDLNRLPGPHKHIAMAPQWDFLEMLATAAETEPTFRLRRSTEVTGLLRSGDRITGIEYRTASGETGAL
KADLTVACDGRGSALRAAAGMRPRQFGVPIDIWWFRLPKHPDDPQGPRARVGANRFMVLLDRGDYFQCGYLIGKGTDSQM
RSGDVQVLRDRVAEMAPWLAARTNAIASWDDVKLLDIQLNRLRKWYRDGLLFIGDAAHAMSPVGGVGINLAIADAVATAR
ILAEPLRTGTLTTADLRKVQLRRWVPTALIQRIQRAVHRRVFSAVDSSTTAASNAKIASVLSIATKYPWLQAVPAYGVAI
GPLPEHAPDFARRSPID

Sequences:

>Translated_417_residues
MIKPELPQGTTCAIAGGGPAGMMLALLLARAGIDVTVLEKHPDFLRDFRGDTVHASTLNLIDELGLGPRFAAMPHNLVEQ
VTVDLGEQTFRLGDLNRLPGPHKHIAMAPQWDFLEMLATAAETEPTFRLRRSTEVTGLLRSGDRITGIEYRTASGETGAL
KADLTVACDGRGSALRAAAGMRPRQFGVPIDIWWFRLPKHPDDPQGPRARVGANRFMVLLDRGDYFQCGYLIGKGTDSQM
RSGDVQVLRDRVAEMAPWLAARTNAIASWDDVKLLDIQLNRLRKWYRDGLLFIGDAAHAMSPVGGVGINLAIADAVATAR
ILAEPLRTGTLTTADLRKVQLRRWVPTALIQRIQRAVHRRVFSAVDSSTTAASNAKIASVLSIATKYPWLQAVPAYGVAI
GPLPEHAPDFARRSPID
>Mature_417_residues
MIKPELPQGTTCAIAGGGPAGMMLALLLARAGIDVTVLEKHPDFLRDFRGDTVHASTLNLIDELGLGPRFAAMPHNLVEQ
VTVDLGEQTFRLGDLNRLPGPHKHIAMAPQWDFLEMLATAAETEPTFRLRRSTEVTGLLRSGDRITGIEYRTASGETGAL
KADLTVACDGRGSALRAAAGMRPRQFGVPIDIWWFRLPKHPDDPQGPRARVGANRFMVLLDRGDYFQCGYLIGKGTDSQM
RSGDVQVLRDRVAEMAPWLAARTNAIASWDDVKLLDIQLNRLRKWYRDGLLFIGDAAHAMSPVGGVGINLAIADAVATAR
ILAEPLRTGTLTTADLRKVQLRRWVPTALIQRIQRAVHRRVFSAVDSSTTAASNAKIASVLSIATKYPWLQAVPAYGVAI
GPLPEHAPDFARRSPID

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Five Of 2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol Resulting In The Formation Of 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.13.- [C]

Molecular weight: Translated: 45482; Mature: 45482

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPELPQGTTCAIAGGGPAGMMLALLLARAGIDVTVLEKHPDFLRDFRGDTVHASTLNL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEHHHHHH
IDELGLGPRFAAMPHNLVEQVTVDLGEQTFRLGDLNRLPGPHKHIAMAPQWDFLEMLATA
HHHHCCCCCHHHCCHHHHHHHHHHCCCHHEECCCCCCCCCCCCEEEECCCHHHHHHHHHH
AETEPTFRLRRSTEVTGLLRSGDRITGIEYRTASGETGALKADLTVACDGRGSALRAAAG
HCCCCCEEEECCCHHHHHHHCCCEEECEEEEECCCCCCEEEEEEEEEECCCCCHHHHHCC
MRPRQFGVPIDIWWFRLPKHPDDPQGPRARVGANRFMVLLDRGDYFQCGYLIGKGTDSQM
CCCHHCCCCEEEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCCEEEEEEEEECCCCHHH
RSGDVQVLRDRVAEMAPWLAARTNAIASWDDVKLLDIQLNRLRKWYRDGLLFIGDAAHAM
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECHHHHC
SPVGGVGINLAIADAVATARILAEPLRTGTLTTADLRKVQLRRWVPTALIQRIQRAVHRR
CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VFSAVDSSTTAASNAKIASVLSIATKYPWLQAVPAYGVAIGPLPEHAPDFARRSPID
HHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MIKPELPQGTTCAIAGGGPAGMMLALLLARAGIDVTVLEKHPDFLRDFRGDTVHASTLNL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEHHHHHH
IDELGLGPRFAAMPHNLVEQVTVDLGEQTFRLGDLNRLPGPHKHIAMAPQWDFLEMLATA
HHHHCCCCCHHHCCHHHHHHHHHHCCCHHEECCCCCCCCCCCCEEEECCCHHHHHHHHHH
AETEPTFRLRRSTEVTGLLRSGDRITGIEYRTASGETGALKADLTVACDGRGSALRAAAG
HCCCCCEEEECCCHHHHHHHCCCEEECEEEEECCCCCCEEEEEEEEEECCCCCHHHHHCC
MRPRQFGVPIDIWWFRLPKHPDDPQGPRARVGANRFMVLLDRGDYFQCGYLIGKGTDSQM
CCCHHCCCCEEEEEEECCCCCCCCCCCCHHCCCCEEEEEEECCCEEEEEEEEECCCCHHH
RSGDVQVLRDRVAEMAPWLAARTNAIASWDDVKLLDIQLNRLRKWYRDGLLFIGDAAHAM
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECHHHHC
SPVGGVGINLAIADAVATARILAEPLRTGTLTTADLRKVQLRRWVPTALIQRIQRAVHRR
CCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VFSAVDSSTTAASNAKIASVLSIATKYPWLQAVPAYGVAIGPLPEHAPDFARRSPID
HHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! [C]

Specific reaction: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! = 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA