| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628729
Identifier: 169628729
GI number: 169628729
Start: 1668474
End: 1669073
Strand: Reverse
Name: 169628729
Synonym: MAB_1639c
Alternate gene names: NA
Gene position: 1669073-1668474 (Counterclockwise)
Preceding gene: 169628736
Following gene: 169628724
Centisome position: 32.94
GC content: 68.83
Gene sequence:
>600_bases ATGGCGTCACAGTGGCAGACGCTCGGGCGCAAGCTCGGGAAGATCGCGGTGAACACTCTGGAACAAGTCGTGTTCCGCGA AGGCCCGAAGGTGCTGCGGCAACTGCAGGGCTCGGAATTCGTCCAGCGCGGGCTTCAGCTCGGGCTGGAAGCGATCGGCG TCGTCGAACCGGAGCAGCAGACCGCCATCCCGGGCCGTCCGGTGACCAACCGCAGCGTGCCCACCGCCCACCGGGCCCGC CGCATCGAGTACTCCCCCGACTTGGATGGGCGCGCCGATCCCGGCGAGATCGTATGGACCTGGGTGGTCTACGAGGATGA CCCCGCACAGGGCAAGGACCGCCCCGTGCTGGTGGTGGGGCGCGATGGCGCACTGCTGCTGGGCCTGATGCTCTCGAGCC GGGAACGTCTTGACAGCGATCCGGACTGGGTGGCGCTGGGCAGCGGCAGCTGGGATTACGACGGGCGGCCCAGCTGGGTG CGCCTCGACCGGGTGCTGGACGTACCCGAAGAGGGCATCCGCCGCGAGGGCGCGATTCTGGACGTGGAGCGATTCAACGT GGTCGCGGCGCGTCTGCGCGCCCAATTCTCCTGGAGCTGA
Upstream 100 bases:
>100_bases GTCGTGTCGGCAAAACTTGGCACGGCACCATGCTCCCATGCCGCGCGGCATGCTTCTGACACGCACGTCGTGAGGGACTA CCGGTCAGTATGCTCGCACC
Downstream 100 bases:
>100_bases GCGGGAGGCCCGTGAAGCCCCAGCGTGCTCAGTGCTCGACGGAGTTGTGTACCGGCAGCGGCGTGAACATCGCTTGATCG ACGAACTGCGCGGTGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MASQWQTLGRKLGKIAVNTLEQVVFREGPKVLRQLQGSEFVQRGLQLGLEAIGVVEPEQQTAIPGRPVTNRSVPTAHRAR RIEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVGRDGALLLGLMLSSRERLDSDPDWVALGSGSWDYDGRPSWV RLDRVLDVPEEGIRREGAILDVERFNVVAARLRAQFSWS
Sequences:
>Translated_199_residues MASQWQTLGRKLGKIAVNTLEQVVFREGPKVLRQLQGSEFVQRGLQLGLEAIGVVEPEQQTAIPGRPVTNRSVPTAHRAR RIEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVGRDGALLLGLMLSSRERLDSDPDWVALGSGSWDYDGRPSWV RLDRVLDVPEEGIRREGAILDVERFNVVAARLRAQFSWS >Mature_198_residues ASQWQTLGRKLGKIAVNTLEQVVFREGPKVLRQLQGSEFVQRGLQLGLEAIGVVEPEQQTAIPGRPVTNRSVPTAHRARR IEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVGRDGALLLGLMLSSRERLDSDPDWVALGSGSWDYDGRPSWVR LDRVLDVPEEGIRREGAILDVERFNVVAARLRAQFSWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22280; Mature: 22148
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQWQTLGRKLGKIAVNTLEQVVFREGPKVLRQLQGSEFVQRGLQLGLEAIGVVEPEQQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH TAIPGRPVTNRSVPTAHRARRIEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVG CCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEC RDGALLLGLMLSSRERLDSDPDWVALGSGSWDYDGRPSWVRLDRVLDVPEEGIRREGAIL CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEHHHHHCCCHHHHHCCCCEE DVERFNVVAARLRAQFSWS EHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASQWQTLGRKLGKIAVNTLEQVVFREGPKVLRQLQGSEFVQRGLQLGLEAIGVVEPEQQ CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH TAIPGRPVTNRSVPTAHRARRIEYSPDLDGRADPGEIVWTWVVYEDDPAQGKDRPVLVVG CCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEC RDGALLLGLMLSSRERLDSDPDWVALGSGSWDYDGRPSWVRLDRVLDVPEEGIRREGAIL CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEHHHHHCCCHHHHHCCCCEE DVERFNVVAARLRAQFSWS EHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA