| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628659
Identifier: 169628659
GI number: 169628659
Start: 1598660
End: 1599187
Strand: Direct
Name: 169628659
Synonym: MAB_1569
Alternate gene names: NA
Gene position: 1598660-1599187 (Clockwise)
Preceding gene: 169628658
Following gene: 169628660
Centisome position: 31.55
GC content: 67.8
Gene sequence:
>528_bases GTGACGCGCATGGGCACGGCCACGGCCACGCCGGCGCCGAGGCGATTGGAGGGTCCGCAAGTGGCAAGTGGTGACGTCGC AGTCAAGCCCGCCGGAGACCTTCCTCGCGGCTGGGCCGAGACCGTCAGTGGGCGCCTCTCCGGTGTTACCGAGCCCGGCG AACTGTCGGTCCACTACCCGTTCCCCAACTACCAGCTGGCGACGCTCGACGACGCGCTGACGTACGGGTCGCGGCAGTCG AAGGCTCGCTTCTCGGTCTACATCGGCGATCTGGGTAATGACACCAACGCCGGCGCGCGTGAAGTCTTCCTCAAGGTGCC GACCCCGGATGAGGCCGTACTGATCGCTGTTTCCCCGGACCAGCACGTCGTCGAGGTTGTGTACGGCGAGGCACTCAAGG GACGTGGCGCCGAGTCGGCCGCCGACCTTGGTGTAGCCGCCGCGCTGGCTGCCTTCAAAGAAGGCAACCTGCTCGACGGG ATCATCAGCGCGGTGCGCGTGATGAGCGCCGCCATCGCCCGCCCCTAG
Upstream 100 bases:
>100_bases TGGACCATGCGCAAGAAGGGGCCGCACCCCGCGACCTACAACATGAACGACGGCTGGACGCACGGCCCGATCCTGTGGGC CGCCGTCGACGAGAACATTG
Downstream 100 bases:
>100_bases TTCTTCGCGCGGGGTTTCCCCGCGCACCCGCTACGCCGAGCGTGAAGCTGCTGCGAGAATTTCGAACTTTTCCCGCAGCA GCTTCACGCTCGCCGCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTRMGTATATPAPRRLEGPQVASGDVAVKPAGDLPRGWAETVSGRLSGVTEPGELSVHYPFPNYQLATLDDALTYGSRQS KARFSVYIGDLGNDTNAGAREVFLKVPTPDEAVLIAVSPDQHVVEVVYGEALKGRGAESAADLGVAAALAAFKEGNLLDG IISAVRVMSAAIARP
Sequences:
>Translated_175_residues MTRMGTATATPAPRRLEGPQVASGDVAVKPAGDLPRGWAETVSGRLSGVTEPGELSVHYPFPNYQLATLDDALTYGSRQS KARFSVYIGDLGNDTNAGAREVFLKVPTPDEAVLIAVSPDQHVVEVVYGEALKGRGAESAADLGVAAALAAFKEGNLLDG IISAVRVMSAAIARP >Mature_174_residues TRMGTATATPAPRRLEGPQVASGDVAVKPAGDLPRGWAETVSGRLSGVTEPGELSVHYPFPNYQLATLDDALTYGSRQSK ARFSVYIGDLGNDTNAGAREVFLKVPTPDEAVLIAVSPDQHVVEVVYGEALKGRGAESAADLGVAAALAAFKEGNLLDGI ISAVRVMSAAIARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18175; Mature: 18043
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMGTATATPAPRRLEGPQVASGDVAVKPAGDLPRGWAETVSGRLSGVTEPGELSVHYP CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC FPNYQLATLDDALTYGSRQSKARFSVYIGDLGNDTNAGAREVFLKVPTPDEAVLIAVSPD CCCCEEEEHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCC QHVVEVVYGEALKGRGAESAADLGVAAALAAFKEGNLLDGIISAVRVMSAAIARP CCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRMGTATATPAPRRLEGPQVASGDVAVKPAGDLPRGWAETVSGRLSGVTEPGELSVHYP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC FPNYQLATLDDALTYGSRQSKARFSVYIGDLGNDTNAGAREVFLKVPTPDEAVLIAVSPD CCCCEEEEHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCC QHVVEVVYGEALKGRGAESAADLGVAAALAAFKEGNLLDGIISAVRVMSAAIARP CCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]