Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628660

Identifier: 169628660

GI number: 169628660

Start: 1599313

End: 1600152

Strand: Direct

Name: 169628660

Synonym: MAB_1570

Alternate gene names: NA

Gene position: 1599313-1600152 (Clockwise)

Preceding gene: 169628659

Following gene: 169628662

Centisome position: 31.56

GC content: 67.02

Gene sequence:

>840_bases
ATGGGGGAACCATTCGTGGGCAGCGAGGCGGTCAGATCCGGCAGGCTGACGGCGTACGCCCTGCGCACCCGCTACGTCGC
GATCCACCCAGACGTCTATCTGCCGCGCGGCGCGCAACTCACGCCACTGGTGCGCGCTCAGGCCTCGTGGCTGTGGACGG
GTCGCAGGGGGATCCTTGCGGGCCACTCGGCATCGGCGCTCCATGGCGCTCGGTGGATCGATGCAGCGCGCAATGCCGAG
ATAGTTCATGACAATCGGCATCGACAGCCGGGAATCACCGTCTGGTCCGGGGAAATCGCGCCCGACGAGATCTGCGTCGT
CCGGGGAATGCGGGCGACTACCGCCGCCCGCACCGCCCTCGACCTCGCCTGTCGGTGCCCGCGAGGACGCGCGGTGGCCG
CGATCGATGCGCTGTGCCGCGCGACTGAACTCCAGATCTCCGAGGCGCTCGAACTCGCGTCAAGACATGCCGGGATGCGC
GGCATTCGCCGGGCACGTACAGCTTTCGAGCTTGTAGACGCCGGCGCGCAGTCGCCCAAGGAGACGTGGCTGCGTTTGTT
GCTCCGGGATGCGGGGCTGCCGCCGGTAAGCACGCAGATCCTGGTGCACAACGGGGACTTCGTCGCACTCGCCTACATCG
ACATGGGTTGGGAGGACGTCATGGTCGGCATCGAGTACGACGGCGACCAGCACCGCAGCGACCGCCGCCAGTACCTCAAG
GACATCAGGCGGCTAGAGATGCTCGAGGGCATGGGCTGGCTGATCGTCCGAGTAGTCGCCGAGGATCACCCCCACGACAT
CATTCGCCGAGTAAGGGAGGCTCTAGCCCGCCGAGTGTGA

Upstream 100 bases:

>100_bases
ACCCGCTACGCCGAGCGTGAAGCTGCTGCGAGAATTTCGAACTTTTCCCGCAGCAGCTTCACGCTCGCCGCGTGTCAGGG
GTTGAGCGCACACTGCCCGC

Downstream 100 bases:

>100_bases
AGCCATTGCGGGAAAAGTGCGATAACCCCCGCAGTAGCTTCACGCTCGGCGCCATGGGGCTATGAGCCGGCGTCGAACTC
GCGAGCTCGTAGTGACCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASWLWTGRRGILAGHSASALHGARWIDAARNAE
IVHDNRHRQPGITVWSGEIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDALCRATELQISEALELASRHAGMR
GIRRARTAFELVDAGAQSPKETWLRLLLRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLK
DIRRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV

Sequences:

>Translated_279_residues
MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASWLWTGRRGILAGHSASALHGARWIDAARNAE
IVHDNRHRQPGITVWSGEIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDALCRATELQISEALELASRHAGMR
GIRRARTAFELVDAGAQSPKETWLRLLLRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLK
DIRRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV
>Mature_278_residues
GEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASWLWTGRRGILAGHSASALHGARWIDAARNAEI
VHDNRHRQPGITVWSGEIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDALCRATELQISEALELASRHAGMRG
IRRARTAFELVDAGAQSPKETWLRLLLRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLKD
IRRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31126; Mature: 30995

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASWLWTGRRGILA
CCCCCCCHHHHHCCCEEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHEEEECCCCEEE
GHSASALHGARWIDAARNAEIVHDNRHRQPGITVWSGEIAPDEICVVRGMRATTAARTAL
CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHH
DLACRCPRGRAVAAIDALCRATELQISEALELASRHAGMRGIRRARTAFELVDAGAQSPK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ETWLRLLLRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLK
HHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCHHHEEEEEEECCCCCHHHHHHHHH
DIRRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQASWLWTGRRGILA
CCCCCCHHHHHCCCEEEEEEEEEEEEECCCEECCCCCCCCHHHHHHHHEEEECCCCEEE
GHSASALHGARWIDAARNAEIVHDNRHRQPGITVWSGEIAPDEICVVRGMRATTAARTAL
CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHH
DLACRCPRGRAVAAIDALCRATELQISEALELASRHAGMRGIRRARTAFELVDAGAQSPK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ETWLRLLLRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLK
HHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCHHHEEEEEEECCCCCHHHHHHHHH
DIRRLEMLEGMGWLIVRVVAEDHPHDIIRRVREALARRV
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]