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The map label for this gene is ssb [H]

Identifier: 169628649

GI number: 169628649

Start: 1586455

End: 1586937

Strand: Direct

Name: ssb [H]

Synonym: MAB_1559

Alternate gene names: 169628649

Gene position: 1586455-1586937 (Clockwise)

Preceding gene: 169628647

Following gene: 169628650

Centisome position: 31.31

GC content: 63.98

Gene sequence:

>483_bases
ATGTTTGAAACTCCAGTGACTGTGATCGGTTCCATCGTCGGGGACCTCAAGCGGCGCCAGGTCGGATCCGACGAGATGAT
CAAATTCCGCGTCGCCAGCAACGCGCGCCGACGGCGCGAGGACGGCAGTTGGGTGAATTCGAACTCCCTCTTCATCAACG
TCACGTGCTGGGGCCGACTGGTTACCGGCGTCGGCGCTGCGCTGGGAAAGGGGGCGCCGGTGATCGTGCACGGTCATCTG
CACACCAGCGAGTTCGAAGACAAGGACGGCAACCGTCGTCAGGTGACGGAAATGAAAGCGATCGCGGTGGGGCCGGACCT
GTCGCGGACCATCGCCCGGATCGAGAAGGTCGGGTACACCGGCAAGCCGGACGATGCCGAGGCGGCCGAGCAACCCGATC
CCGGTGCCGAGGAATCGGCAGTAGTGCAGCCGGAAGGGGGCGAGAGCAGCGAAGAGTCGGTGAACCTGCGGTTGAGCGCT
TAA

Upstream 100 bases:

>100_bases
CGGCGGGTGTCGGTGTCGCCGGGGTTACTGGAGTCACCAAGAGCACCCGCCAGTGGTGCGGAGACAGAGATACAGAGACA
GGTAAGAAAGGGCACGGACC

Downstream 100 bases:

>100_bases
CCCAGGGCTGACACCGGCGACTGCGTGGTCGCCTCTCACCTAGGATGGTTCGGGCAGCTCAGCAGAACGGTCGTGAGCTG
CGGCGAAAGAACTTAGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFETPVTVIGSIVGDLKRRQVGSDEMIKFRVASNARRRREDGSWVNSNSLFINVTCWGRLVTGVGAALGKGAPVIVHGHL
HTSEFEDKDGNRRQVTEMKAIAVGPDLSRTIARIEKVGYTGKPDDAEAAEQPDPGAEESAVVQPEGGESSEESVNLRLSA

Sequences:

>Translated_160_residues
MFETPVTVIGSIVGDLKRRQVGSDEMIKFRVASNARRRREDGSWVNSNSLFINVTCWGRLVTGVGAALGKGAPVIVHGHL
HTSEFEDKDGNRRQVTEMKAIAVGPDLSRTIARIEKVGYTGKPDDAEAAEQPDPGAEESAVVQPEGGESSEESVNLRLSA
>Mature_160_residues
MFETPVTVIGSIVGDLKRRQVGSDEMIKFRVASNARRRREDGSWVNSNSLFINVTCWGRLVTGVGAALGKGAPVIVHGHL
HTSEFEDKDGNRRQVTEMKAIAVGPDLSRTIARIEKVGYTGKPDDAEAAEQPDPGAEESAVVQPEGGESSEESVNLRLSA

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17229; Mature: 17229

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETPVTVIGSIVGDLKRRQVGSDEMIKFRVASNARRRREDGSWVNSNSLFINVTCWGRL
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCHHHHCCCCCEECCCCEEEEEEEHHHH
VTGVGAALGKGAPVIVHGHLHTSEFEDKDGNRRQVTEMKAIAVGPDLSRTIARIEKVGYT
HHHHHHHHCCCCCEEEECCEECCCCCCCCCCCHHHHHHEEEEECCCHHHHHHHHHHCCCC
GKPDDAEAAEQPDPGAEESAVVQPEGGESSEESVNLRLSA
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MFETPVTVIGSIVGDLKRRQVGSDEMIKFRVASNARRRREDGSWVNSNSLFINVTCWGRL
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCHHHHCCCCCEECCCCEEEEEEEHHHH
VTGVGAALGKGAPVIVHGHLHTSEFEDKDGNRRQVTEMKAIAVGPDLSRTIARIEKVGYT
HHHHHHHHCCCCCEEEECCEECCCCCCCCCCCHHHHHHEEEEECCCHHHHHHHHHHCCCC
GKPDDAEAAEQPDPGAEESAVVQPEGGESSEESVNLRLSA
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]