| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yebZ [C]
Identifier: 169628647
GI number: 169628647
Start: 1582646
End: 1584655
Strand: Direct
Name: yebZ [C]
Synonym: MAB_1557
Alternate gene names: 169628647
Gene position: 1582646-1584655 (Clockwise)
Preceding gene: 169628646
Following gene: 169628649
Centisome position: 31.23
GC content: 65.47
Gene sequence:
>2010_bases GTGACCACAGCTCCCACCGCCCGGAAGACCGATTCGCCGATCTGGACAATCGTCGTCGGTCTCGCGGTACTGGCGGGCCT GGTCGCTGCCACCATCGGCGCGTTGTCTCTCGCGGAAGCCCTGCTCGCGACCGGTCTGCCCAACCCTGGCCCCGTAACCT CCTATGGTCTGCCGTTCGTGCGCGCGGCCGCGGAAATCGCCGCCGTAGTTGCCGTCGGCGCGTTTCTGCTGGCGGCTTTT TTCGTGCCGCCACAGACCAGCGGGGTGCTCGACGTGGACGGATATCGCGCGCTGCGCCTCGGCACGGCCGCCGCGACGGT ACTCGCGGTGCTCTCCGCCGTCATGGTGCCGCTGTCAGTGTCCGACGTGTCCGGTCAGCCGCTCAGCGATTTCGGTCCGG GAGAGCTGTGGACATTGGCAAGTGAGATCGAAACGGTGAATGCCTGGCGCTGGATGGCCTTCATCGCCGCCGGCGTCGCG ATCACCAGCCGTGTGGTGCTGCGCTGGTCGTGGACCCCGCTGCTGGTACTCGGATCGGTGGCCACGCTGATGCCGCTGGC CCTCGTGGGGCATTCGGCCACCGGTGGCGCTCACGACCTGGGCACCAACAGCCTCATCATCCATTTGGTGTCGGCGGCAC TATGGGCGGGCGGGCTGGTTTCGCTGCTCATCCACGCGCTGCGCGGCGGCGGGCACCTCGATGTGGCGGCGCGCCGATTC TCCATGCTGGCGCTGTGGTGTTACGTCGCCATCGGCCTTAGCGGAATCATCAACGCCCTGATCCGGGTGCAGCTTTCAGA CCTGTTTACCACCCGCTACGGCTGGCTGCTGATGGGCAAGGCCACGGCGCTGCTGCTCTTAGGCGTGCTGGGGTATCTGC AACGGCGTTCGGCGATAACGGCACTGGATGAGGACCCCGAGAACCGGCAGCCACTGATTCGGCTGGCCGGAGTGGAAGCC ATCATCTTCGCGGTCACCTTCGGCATCGCCGTCGGGTTGGGGCGCACCCCGCCTCCGCCGCCGGTCAACCTCAATCCATC CCCGGTCGAGGTTGCCATCGGATACAACCTCGATGGTCCGCCGACGCCGGGCCGGCTGATGTTCGATTGGCGCTTCGACC TCATCTTCGGAACGGCCGCCATCGTTTTCGCTATCGCGTATGTCGTGGGTGTGCGTCGCCTCAAGCAACGTGGTGACGAA TGGCCCATCGGGCGCACCATTTCGTGGCTATTCGGCTGCGGCTTCTTGCTGATCGCCACCTCATCGGGTGTCGGCCGGTA CATGCCCGCCATGTTCAGCATGCACATGGTCGCGCACATGATGCTCTCGATGTTGGTGCCGGTGCTGCTGGTACTGGGTG GTCCCGTCACGCTGCTGCTGCGGGTGCTGCCCGCGGCAGGCAAGAGTGATCCGCCCGGACTGCGCGAGTGGGTCCAATTG GCGTTGCACAGTAAGTTCTCTCGCTTCTTGACCCATCCGTTGGTGGCGACCTCGTTGTTCATCGGCGGGTTCTACGGCCT CTACCTCAGCGGGCTGTATGACGCCGCCGTCGACGTGCACGCGGCGCACCTGGCGATGAATCTGCACTTCCTGCTCAGCG GCTACCTGTTCTATTGGGTGGTCATCGGCATCGACCCGTCGCCGCGCCGTCTGCCCCCGGTCGCGAAGCTGGGCATCGTG CTGGTCTCGCTGCCGCTGCATGCCTTTTTCGGGGTCATCCTGATGGGCACGAAATCGATTCTCGGCGAGAAGTTTTACAG CAACCTGGCATTGCCATGGAGGATCGACCTGGCCGCCGACCAGCACATGGGGGGCGCCATCACCTGGGCAACGGGCGAGC TGCCATTGATGGTGGTGATGATCGCCCTGGTGGTCCAGTGGTCACGCTCGGATGAGCGCCTGGCCCGCCGCCAGGATCGC GCCGCCGACCGCGATGACGACGCGGACCTGGCCGCCTACAACGCCATGCTCGCGAAAATGGCCCAGCACAACGAGAAAAC GCGCGGTTAG
Upstream 100 bases:
>100_bases TGCTCTATCCAACTGAGCTACGGAGGCATGCGGCGCTAGCCGGACGGGAGTCTATCGAACCGGTGGCGGTGTGGATCGCA TCTCGCCATACCCTTGACTG
Downstream 100 bases:
>100_bases ACCGCTCCGGCCGCGATGGCTGCTGGCCAGCTGCCGTGCTCGCTGATGTCGACGCCGGCCTGTGCGGCGGCACCGTCGCA TCCAAAGCCGGTGCGCCACA
Product: copper resistance D precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MTTAPTARKTDSPIWTIVVGLAVLAGLVAATIGALSLAEALLATGLPNPGPVTSYGLPFVRAAAEIAAVVAVGAFLLAAF FVPPQTSGVLDVDGYRALRLGTAAATVLAVLSAVMVPLSVSDVSGQPLSDFGPGELWTLASEIETVNAWRWMAFIAAGVA ITSRVVLRWSWTPLLVLGSVATLMPLALVGHSATGGAHDLGTNSLIIHLVSAALWAGGLVSLLIHALRGGGHLDVAARRF SMLALWCYVAIGLSGIINALIRVQLSDLFTTRYGWLLMGKATALLLLGVLGYLQRRSAITALDEDPENRQPLIRLAGVEA IIFAVTFGIAVGLGRTPPPPPVNLNPSPVEVAIGYNLDGPPTPGRLMFDWRFDLIFGTAAIVFAIAYVVGVRRLKQRGDE WPIGRTISWLFGCGFLLIATSSGVGRYMPAMFSMHMVAHMMLSMLVPVLLVLGGPVTLLLRVLPAAGKSDPPGLREWVQL ALHSKFSRFLTHPLVATSLFIGGFYGLYLSGLYDAAVDVHAAHLAMNLHFLLSGYLFYWVVIGIDPSPRRLPPVAKLGIV LVSLPLHAFFGVILMGTKSILGEKFYSNLALPWRIDLAADQHMGGAITWATGELPLMVVMIALVVQWSRSDERLARRQDR AADRDDDADLAAYNAMLAKMAQHNEKTRG
Sequences:
>Translated_669_residues MTTAPTARKTDSPIWTIVVGLAVLAGLVAATIGALSLAEALLATGLPNPGPVTSYGLPFVRAAAEIAAVVAVGAFLLAAF FVPPQTSGVLDVDGYRALRLGTAAATVLAVLSAVMVPLSVSDVSGQPLSDFGPGELWTLASEIETVNAWRWMAFIAAGVA ITSRVVLRWSWTPLLVLGSVATLMPLALVGHSATGGAHDLGTNSLIIHLVSAALWAGGLVSLLIHALRGGGHLDVAARRF SMLALWCYVAIGLSGIINALIRVQLSDLFTTRYGWLLMGKATALLLLGVLGYLQRRSAITALDEDPENRQPLIRLAGVEA IIFAVTFGIAVGLGRTPPPPPVNLNPSPVEVAIGYNLDGPPTPGRLMFDWRFDLIFGTAAIVFAIAYVVGVRRLKQRGDE WPIGRTISWLFGCGFLLIATSSGVGRYMPAMFSMHMVAHMMLSMLVPVLLVLGGPVTLLLRVLPAAGKSDPPGLREWVQL ALHSKFSRFLTHPLVATSLFIGGFYGLYLSGLYDAAVDVHAAHLAMNLHFLLSGYLFYWVVIGIDPSPRRLPPVAKLGIV LVSLPLHAFFGVILMGTKSILGEKFYSNLALPWRIDLAADQHMGGAITWATGELPLMVVMIALVVQWSRSDERLARRQDR AADRDDDADLAAYNAMLAKMAQHNEKTRG >Mature_668_residues TTAPTARKTDSPIWTIVVGLAVLAGLVAATIGALSLAEALLATGLPNPGPVTSYGLPFVRAAAEIAAVVAVGAFLLAAFF VPPQTSGVLDVDGYRALRLGTAAATVLAVLSAVMVPLSVSDVSGQPLSDFGPGELWTLASEIETVNAWRWMAFIAAGVAI TSRVVLRWSWTPLLVLGSVATLMPLALVGHSATGGAHDLGTNSLIIHLVSAALWAGGLVSLLIHALRGGGHLDVAARRFS MLALWCYVAIGLSGIINALIRVQLSDLFTTRYGWLLMGKATALLLLGVLGYLQRRSAITALDEDPENRQPLIRLAGVEAI IFAVTFGIAVGLGRTPPPPPVNLNPSPVEVAIGYNLDGPPTPGRLMFDWRFDLIFGTAAIVFAIAYVVGVRRLKQRGDEW PIGRTISWLFGCGFLLIATSSGVGRYMPAMFSMHMVAHMMLSMLVPVLLVLGGPVTLLLRVLPAAGKSDPPGLREWVQLA LHSKFSRFLTHPLVATSLFIGGFYGLYLSGLYDAAVDVHAAHLAMNLHFLLSGYLFYWVVIGIDPSPRRLPPVAKLGIVL VSLPLHAFFGVILMGTKSILGEKFYSNLALPWRIDLAADQHMGGAITWATGELPLMVVMIALVVQWSRSDERLARRQDRA ADRDDDADLAAYNAMLAKMAQHNEKTRG
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1998 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 - InterPro: IPR019108 [H]
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 71423; Mature: 71292
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPTARKTDSPIWTIVVGLAVLAGLVAATIGALSLAEALLATGLPNPGPVTSYGLPFV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RAAAEIAAVVAVGAFLLAAFFVPPQTSGVLDVDGYRALRLGTAAATVLAVLSAVMVPLSV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEE SDVSGQPLSDFGPGELWTLASEIETVNAWRWMAFIAAGVAITSRVVLRWSWTPLLVLGSV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHH ATLMPLALVGHSATGGAHDLGTNSLIIHLVSAALWAGGLVSLLIHALRGGGHLDVAARRF HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SMLALWCYVAIGLSGIINALIRVQLSDLFTTRYGWLLMGKATALLLLGVLGYLQRRSAIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDEDPENRQPLIRLAGVEAIIFAVTFGIAVGLGRTPPPPPVNLNPSPVEVAIGYNLDGP HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC PTPGRLMFDWRFDLIFGTAAIVFAIAYVVGVRRLKQRGDEWPIGRTISWLFGCGFLLIAT CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHEEEC SSGVGRYMPAMFSMHMVAHMMLSMLVPVLLVLGGPVTLLLRVLPAAGKSDPPGLREWVQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH ALHSKFSRFLTHPLVATSLFIGGFYGLYLSGLYDAAVDVHAAHLAMNLHFLLSGYLFYWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VIGIDPSPRRLPPVAKLGIVLVSLPLHAFFGVILMGTKSILGEKFYSNLALPWRIDLAAD EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC QHMGGAITWATGELPLMVVMIALVVQWSRSDERLARRQDRAADRDDDADLAAYNAMLAKM CCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AQHNEKTRG HHHCCCCCC >Mature Secondary Structure TTAPTARKTDSPIWTIVVGLAVLAGLVAATIGALSLAEALLATGLPNPGPVTSYGLPFV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RAAAEIAAVVAVGAFLLAAFFVPPQTSGVLDVDGYRALRLGTAAATVLAVLSAVMVPLSV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEE SDVSGQPLSDFGPGELWTLASEIETVNAWRWMAFIAAGVAITSRVVLRWSWTPLLVLGSV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHH ATLMPLALVGHSATGGAHDLGTNSLIIHLVSAALWAGGLVSLLIHALRGGGHLDVAARRF HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SMLALWCYVAIGLSGIINALIRVQLSDLFTTRYGWLLMGKATALLLLGVLGYLQRRSAIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDEDPENRQPLIRLAGVEAIIFAVTFGIAVGLGRTPPPPPVNLNPSPVEVAIGYNLDGP HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC PTPGRLMFDWRFDLIFGTAAIVFAIAYVVGVRRLKQRGDEWPIGRTISWLFGCGFLLIAT CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHEEEC SSGVGRYMPAMFSMHMVAHMMLSMLVPVLLVLGGPVTLLLRVLPAAGKSDPPGLREWVQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH ALHSKFSRFLTHPLVATSLFIGGFYGLYLSGLYDAAVDVHAAHLAMNLHFLLSGYLFYWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VIGIDPSPRRLPPVAKLGIVLVSLPLHAFFGVILMGTKSILGEKFYSNLALPWRIDLAAD EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC QHMGGAITWATGELPLMVVMIALVVQWSRSDERLARRQDRAADRDDDADLAAYNAMLAKM CCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AQHNEKTRG HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]