Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628629

Identifier: 169628629

GI number: 169628629

Start: 1559496

End: 1560239

Strand: Reverse

Name: 169628629

Synonym: MAB_1539c

Alternate gene names: NA

Gene position: 1560239-1559496 (Counterclockwise)

Preceding gene: 169628632

Following gene: 169628627

Centisome position: 30.79

GC content: 64.11

Gene sequence:

>744_bases
ATGGACAGCAACCGCCGCGACGATGCGGCCGCCCCGGGCGGCTCCACGTCATACGGTTCGTGGCCGCAGTCCAGCCAGCC
GTTGGACTACCCGGAAGATCCGGCGTACGCGTCCCAGGCATTCGAGTATCCGGCGCTCTCCGGCACTGCCCAGCCGAACC
AGACAGCCGTGCTACCGCAGCAGTATGGGCAGCAATACGGGTCGTACGGCCCTGCCCCAAAGGATCCCGAGCCGCCGCGC
CGGTCAAACACCTTCTGGCTGTGGGTGGTAGGCATCGGCGCATTGGTGGTCATCATCGCGCTGATCATCACCCTGGTCCT
ACTGATCCAGCGTGAAGACCAACAACCCCCGACCGTCGTCTCCAGCCCGACCACACGAACCTCGACAACGACCGCGCCCA
GCCAGCCAACCATACCCCCCATCCCAAGTTTCACCATTCCGCCGATCCCGGTGAATCCACCCACACAGGGCAGTCAAGCC
GCGACGGAGAGCGTCGTCTACGAGGTGGGAGGCCGCGGCCCCGCCCTCAACGTCACCTACTTCGACGCCAGCGGTTCGCT
GCAGATGGAATTCAACGTCAAACTTCCGTGGCGCAAGGAAGTCAAACTGAACACCGAACAGGTGACCAACGCCGTGGTGA
TCGCCGCCGATTTCTCGCACGACGTGTCCTGCACACTGCTCGTCAACGGTGCACAGAAGAGCGCCACCTCCGGCAAGATG
GCGACCTGCAGCACGCTGGGCTAG

Upstream 100 bases:

>100_bases
GCACAACCTCGCCATTCGCCCATGTCCGGCGACGTACCACCGAAAACACGGCCGACCGGCCTTCACCTGCATTGATAGCT
TGACGGGTACCCTGGCGGCC

Downstream 100 bases:

>100_bases
CCTGCGCCGCTGACGATCTCATCACGGACGGGGTCATAGCGGGGAACCTTGACGAGTATCACCGCGACCATTCCCAGCCC
GATCATCAGCACCGGTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDSNRRDDAAAPGGSTSYGSWPQSSQPLDYPEDPAYASQAFEYPALSGTAQPNQTAVLPQQYGQQYGSYGPAPKDPEPPR
RSNTFWLWVVGIGALVVIIALIITLVLLIQREDQQPPTVVSSPTTRTSTTTAPSQPTIPPIPSFTIPPIPVNPPTQGSQA
ATESVVYEVGGRGPALNVTYFDASGSLQMEFNVKLPWRKEVKLNTEQVTNAVVIAADFSHDVSCTLLVNGAQKSATSGKM
ATCSTLG

Sequences:

>Translated_247_residues
MDSNRRDDAAAPGGSTSYGSWPQSSQPLDYPEDPAYASQAFEYPALSGTAQPNQTAVLPQQYGQQYGSYGPAPKDPEPPR
RSNTFWLWVVGIGALVVIIALIITLVLLIQREDQQPPTVVSSPTTRTSTTTAPSQPTIPPIPSFTIPPIPVNPPTQGSQA
ATESVVYEVGGRGPALNVTYFDASGSLQMEFNVKLPWRKEVKLNTEQVTNAVVIAADFSHDVSCTLLVNGAQKSATSGKM
ATCSTLG
>Mature_247_residues
MDSNRRDDAAAPGGSTSYGSWPQSSQPLDYPEDPAYASQAFEYPALSGTAQPNQTAVLPQQYGQQYGSYGPAPKDPEPPR
RSNTFWLWVVGIGALVVIIALIITLVLLIQREDQQPPTVVSSPTTRTSTTTAPSQPTIPPIPSFTIPPIPVNPPTQGSQA
ATESVVYEVGGRGPALNVTYFDASGSLQMEFNVKLPWRKEVKLNTEQVTNAVVIAADFSHDVSCTLLVNGAQKSATSGKM
ATCSTLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26294; Mature: 26294

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNRRDDAAAPGGSTSYGSWPQSSQPLDYPEDPAYASQAFEYPALSGTAQPNQTAVLPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECHH
QYGQQYGSYGPAPKDPEPPRRSNTFWLWVVGIGALVVIIALIITLVLLIQREDQQPPTVV
HHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
SSPTTRTSTTTAPSQPTIPPIPSFTIPPIPVNPPTQGSQAATESVVYEVGGRGPALNVTY
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEE
FDASGSLQMEFNVKLPWRKEVKLNTEQVTNAVVIAADFSHDVSCTLLVNGAQKSATSGKM
ECCCCCEEEEEEEECCCCCCEEECHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCE
ATCSTLG
EEECCCC
>Mature Secondary Structure
MDSNRRDDAAAPGGSTSYGSWPQSSQPLDYPEDPAYASQAFEYPALSGTAQPNQTAVLPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECHH
QYGQQYGSYGPAPKDPEPPRRSNTFWLWVVGIGALVVIIALIITLVLLIQREDQQPPTVV
HHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
SSPTTRTSTTTAPSQPTIPPIPSFTIPPIPVNPPTQGSQAATESVVYEVGGRGPALNVTY
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEE
FDASGSLQMEFNVKLPWRKEVKLNTEQVTNAVVIAADFSHDVSCTLLVNGAQKSATSGKM
ECCCCCEEEEEEEECCCCCCEEECHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCE
ATCSTLG
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA