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The map label for this gene is ydaO [H]

Identifier: 169628632

GI number: 169628632

Start: 1562840

End: 1564675

Strand: Reverse

Name: ydaO [H]

Synonym: MAB_1542c

Alternate gene names: 169628632

Gene position: 1564675-1562840 (Counterclockwise)

Preceding gene: 169628634

Following gene: 169628629

Centisome position: 30.88

GC content: 64.11

Gene sequence:

>1836_bases
GTGGTTTCAGCCCCTCCCGCCAAGCCCAAACCGCAGCGTGTAGCCGACCCTCGGCTGCGCCGCGTCCTCAAGGACGACGC
GCACAAACTGACCGCTGTCGGCGGGCTCGCCGCGCTGTCCCTCGACGCCCTGTCCTCCGTCGCCTACGGCCCGGAGGCCA
TCGTGCTGGCCCTCATCGCCGGTGGCGTCGGCGCCATCGCGTTCACCCTGCCGGTGGCCATCGCGATCACGGTGCTGCTG
ATCGTGCTGGTCTTCTCCTACCGCCAGGTGATCGCCGTGCACCCCGAGGGCGGGGGCTCGTATGCCGTCGCCAAGAAGGA
TCTCGGCCGGGGCGCCAGCCTGGTGGCCGCCGCCAGCCTGGTGGTCGACTATGTGTTGACCGTCGCGGTCAGCCTCGCCG
CCGGGGCCGCGAGCCTGGCGAGCGCCTTTCCCGTCCTGGCGCCACACCTGTTGTCCATCACGTTGATCGGGCTGGCGATA
CTGACCGTGATCAACCTGATCGGCATCAGCGAGTCGGCCAAGGTGCTGATGCTGCCAACGCTGCTGTTCATCGCCTGCAT
CCTGGCGGTGATCGTGTTCGGCTTGATGCACTCCACGCCGGTCGCCGTCATCGGCAAGGAACTCGGTCCCGTCGAACCGG
TGAGCGCGCTGGGAATCGTCCTGGTCCTCAAGGCCTTCGCGGCCGGCTGTTCCTCCCTGACGGGCGTCGAGGCGATCGCC
AACGGCGTCCCAGCGTTCAAGAACCCCGCCATCACGCGAGCACAGAACACCGAAGTAGCCCTCGGAATCCTGTTGGGTGT
CATGTTGATCGGGCTCAGCGTCCTGATCAAGGCCCATCATGTGGTCCCCCGCGGCGACGTGACCATTCTGGCGCAACTCT
CGGCCGCGGCATTCGGCACCGGGCTGCCTTTCTATGTCACCAATGTGACCGTCGCACTGATCCTCGGCTTCGCCGCCAAC
ACCAGCTTCGGCGGATTGCCGGTGTTGATGAGTCTGTTGGCCAAGGACGACCGGATGCCGCACCTGTTCGGGTTGCGCGC
CGAGAAACCGGTCTACCGCTACGGCGTTGTCGCGCTTTCCTTGTTCTCCGCGATCATCCTCATCGCCAGCGATGCCGACA
CCCATCGGCTGCTGCCGCTCTTCGCGATCGGTGTGTTCATCGGATTCACGATCAGCCAAACCGGGTTGGTCAAGCATTGG
TTCGGCGCACGCACCGCCGGCTGGCACTGGAAGGCCGCGCTCAACGGGTTCGGCGCGACACTGTCGGCGATCGCGATGGT
GGTGTTCTTTGTCAGTAAATTCACGGAGGGCGCCTGGGTCCTTCTCATCGTCATCCCGCTGCTGGTGCTGTTGTTCGGAC
GTACCGAGAACTACTACCGGAGCGTCAGAAGCGAACTGGCCCTTGACGAATTGCCTACGCTCACCCCCAACCCGCCCGAC
CAGACACCGTTGGTGATCGTACCCATCGACGACATCAACAAGCGCACTGTTCAACTCCTGGAGGCGGCGCTTCACCTTGG
CGGCGAGGTAGTGCCGGTCACCATCAGCCGCACGGACCAGAGGGCCGCGGCGATTACCAAACGCTGGGCGCAATGGAACC
CGGGTCTTGAGCTGATCGTGCTACCCACCAAGCATCGTTCGCTGGTCACTCCGCTCGTCGAGTACGTCAAGAAGCGTCAG
TGCGACGGCCGCCAGGTGACAGTACTCATCACCGAGATCAAGACCAAACGCCGCTGGCACCAGATCCTGCACAACCAGAC
CGGAATTGTATTGACCGCCAACCTCATCGACCGCACCGACGCCATCGTCGCAAACTACCCATATCGCATGAACTGA

Upstream 100 bases:

>100_bases
ATTGACACCACTGCCATGCGCCCGTGTAGTGCCCGGCCGATCGCCTCAAGATTCCGTAAAGAACCACGAAAACGGCCATG
TCCGTGCCTATTCTCCCCCG

Downstream 100 bases:

>100_bases
CACATCAAGCGGCCATGGCGACCGGTCCGGTGAGAGCGTTCAGCTGGCCGATCGCATGCCAAACGGGTATCGGACCATCC
TCCCAGAGAGGCTGGTCGTG

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MVSAPPAKPKPQRVADPRLRRVLKDDAHKLTAVGGLAALSLDALSSVAYGPEAIVLALIAGGVGAIAFTLPVAIAITVLL
IVLVFSYRQVIAVHPEGGGSYAVAKKDLGRGASLVAAASLVVDYVLTVAVSLAAGAASLASAFPVLAPHLLSITLIGLAI
LTVINLIGISESAKVLMLPTLLFIACILAVIVFGLMHSTPVAVIGKELGPVEPVSALGIVLVLKAFAAGCSSLTGVEAIA
NGVPAFKNPAITRAQNTEVALGILLGVMLIGLSVLIKAHHVVPRGDVTILAQLSAAAFGTGLPFYVTNVTVALILGFAAN
TSFGGLPVLMSLLAKDDRMPHLFGLRAEKPVYRYGVVALSLFSAIILIASDADTHRLLPLFAIGVFIGFTISQTGLVKHW
FGARTAGWHWKAALNGFGATLSAIAMVVFFVSKFTEGAWVLLIVIPLLVLLFGRTENYYRSVRSELALDELPTLTPNPPD
QTPLVIVPIDDINKRTVQLLEAALHLGGEVVPVTISRTDQRAAAITKRWAQWNPGLELIVLPTKHRSLVTPLVEYVKKRQ
CDGRQVTVLITEIKTKRRWHQILHNQTGIVLTANLIDRTDAIVANYPYRMN

Sequences:

>Translated_611_residues
MVSAPPAKPKPQRVADPRLRRVLKDDAHKLTAVGGLAALSLDALSSVAYGPEAIVLALIAGGVGAIAFTLPVAIAITVLL
IVLVFSYRQVIAVHPEGGGSYAVAKKDLGRGASLVAAASLVVDYVLTVAVSLAAGAASLASAFPVLAPHLLSITLIGLAI
LTVINLIGISESAKVLMLPTLLFIACILAVIVFGLMHSTPVAVIGKELGPVEPVSALGIVLVLKAFAAGCSSLTGVEAIA
NGVPAFKNPAITRAQNTEVALGILLGVMLIGLSVLIKAHHVVPRGDVTILAQLSAAAFGTGLPFYVTNVTVALILGFAAN
TSFGGLPVLMSLLAKDDRMPHLFGLRAEKPVYRYGVVALSLFSAIILIASDADTHRLLPLFAIGVFIGFTISQTGLVKHW
FGARTAGWHWKAALNGFGATLSAIAMVVFFVSKFTEGAWVLLIVIPLLVLLFGRTENYYRSVRSELALDELPTLTPNPPD
QTPLVIVPIDDINKRTVQLLEAALHLGGEVVPVTISRTDQRAAAITKRWAQWNPGLELIVLPTKHRSLVTPLVEYVKKRQ
CDGRQVTVLITEIKTKRRWHQILHNQTGIVLTANLIDRTDAIVANYPYRMN
>Mature_611_residues
MVSAPPAKPKPQRVADPRLRRVLKDDAHKLTAVGGLAALSLDALSSVAYGPEAIVLALIAGGVGAIAFTLPVAIAITVLL
IVLVFSYRQVIAVHPEGGGSYAVAKKDLGRGASLVAAASLVVDYVLTVAVSLAAGAASLASAFPVLAPHLLSITLIGLAI
LTVINLIGISESAKVLMLPTLLFIACILAVIVFGLMHSTPVAVIGKELGPVEPVSALGIVLVLKAFAAGCSSLTGVEAIA
NGVPAFKNPAITRAQNTEVALGILLGVMLIGLSVLIKAHHVVPRGDVTILAQLSAAAFGTGLPFYVTNVTVALILGFAAN
TSFGGLPVLMSLLAKDDRMPHLFGLRAEKPVYRYGVVALSLFSAIILIASDADTHRLLPLFAIGVFIGFTISQTGLVKHW
FGARTAGWHWKAALNGFGATLSAIAMVVFFVSKFTEGAWVLLIVIPLLVLLFGRTENYYRSVRSELALDELPTLTPNPPD
QTPLVIVPIDDINKRTVQLLEAALHLGGEVVPVTISRTDQRAAAITKRWAQWNPGLELIVLPTKHRSLVTPLVEYVKKRQ
CDGRQVTVLITEIKTKRRWHQILHNQTGIVLTANLIDRTDAIVANYPYRMN

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64782; Mature: 64782

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAPPAKPKPQRVADPRLRRVLKDDAHKLTAVGGLAALSLDALSSVAYGPEAIVLALIA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GGVGAIAFTLPVAIAITVLLIVLVFSYRQVIAVHPEGGGSYAVAKKDLGRGASLVAAASL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHCCCHHHHHHHHH
VVDYVLTVAVSLAAGAASLASAFPVLAPHLLSITLIGLAILTVINLIGISESAKVLMLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LLFIACILAVIVFGLMHSTPVAVIGKELGPVEPVSALGIVLVLKAFAAGCSSLTGVEAIA
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NGVPAFKNPAITRAQNTEVALGILLGVMLIGLSVLIKAHHVVPRGDVTILAQLSAAAFGT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCC
GLPFYVTNVTVALILGFAANTSFGGLPVLMSLLAKDDRMPHLFGLRAEKPVYRYGVVALS
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHH
LFSAIILIASDADTHRLLPLFAIGVFIGFTISQTGLVKHWFGARTAGWHWKAALNGFGAT
HHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCHH
LSAIAMVVFFVSKFTEGAWVLLIVIPLLVLLFGRTENYYRSVRSELALDELPTLTPNPPD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
QTPLVIVPIDDINKRTVQLLEAALHLGGEVVPVTISRTDQRAAAITKRWAQWNPGLELIV
CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
LPTKHRSLVTPLVEYVKKRQCDGRQVTVLITEIKTKRRWHQILHNQTGIVLTANLIDRTD
ECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEHHCCCC
AIVANYPYRMN
HHEECCCCCCC
>Mature Secondary Structure
MVSAPPAKPKPQRVADPRLRRVLKDDAHKLTAVGGLAALSLDALSSVAYGPEAIVLALIA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GGVGAIAFTLPVAIAITVLLIVLVFSYRQVIAVHPEGGGSYAVAKKDLGRGASLVAAASL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHCCCHHHHHHHHH
VVDYVLTVAVSLAAGAASLASAFPVLAPHLLSITLIGLAILTVINLIGISESAKVLMLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LLFIACILAVIVFGLMHSTPVAVIGKELGPVEPVSALGIVLVLKAFAAGCSSLTGVEAIA
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NGVPAFKNPAITRAQNTEVALGILLGVMLIGLSVLIKAHHVVPRGDVTILAQLSAAAFGT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCC
GLPFYVTNVTVALILGFAANTSFGGLPVLMSLLAKDDRMPHLFGLRAEKPVYRYGVVALS
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHH
LFSAIILIASDADTHRLLPLFAIGVFIGFTISQTGLVKHWFGARTAGWHWKAALNGFGAT
HHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHCCHH
LSAIAMVVFFVSKFTEGAWVLLIVIPLLVLLFGRTENYYRSVRSELALDELPTLTPNPPD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
QTPLVIVPIDDINKRTVQLLEAALHLGGEVVPVTISRTDQRAAAITKRWAQWNPGLELIV
CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
LPTKHRSLVTPLVEYVKKRQCDGRQVTVLITEIKTKRRWHQILHNQTGIVLTANLIDRTD
ECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEEEEHHCCCC
AIVANYPYRMN
HHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]