| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628625
Identifier: 169628625
GI number: 169628625
Start: 1555533
End: 1556483
Strand: Reverse
Name: 169628625
Synonym: MAB_1535c
Alternate gene names: NA
Gene position: 1556483-1555533 (Counterclockwise)
Preceding gene: 169628627
Following gene: 169628623
Centisome position: 30.72
GC content: 64.14
Gene sequence:
>951_bases ATGTCACAAACGCCCAGCGTCGAGGAAGATTCACCCATCGAGCGCACGGCTGTGCGGCTGCTGCGGTCCTCGGTCGATCG CTCCTACCACCCGGAGGTGGACGTCGACTGGGACGCCCCCGACGTACCCGGCCTGCGGTATGTGCCCGATAGGTACATCT CGTTGTACGGCACCAAGATCTTCGAGCGGATGACCGAGGAGGAAAAGATCCGGCTCGGACGCCTGGAGGCGTCGGCCCTG GCCAGCTGGGGGATCCTCGCCGAAAGCGCACTGATGCATCCCATGCTCAAACTCGCTTCGGTCAGCGATCCGCGAAGCGC CACAGCACAGTACGCCCTGACCGAGGTGGCCGACGAATGCCGGCATTCAGTGATGTTCGGTCGCCAAATCAACACCTTGA GCGACCGCAGCTACAACCCGCCCATGATCGCGCGGGCATTGGTTGGCATCACCGCGCTGGCGCCACTTTCGGCCACAATC TTCTCGATGATGCTGATGGTCGAGGAAATACTGGACCGGTTGCAGCGACAAACGATGAACGACGAGACTCTGCAACCCCG AACCCGGGCCATCGCCAAGATTCACGTGATCGAGGAGGCCCGACACATCAGCTACGCACGCGTCGCGCTCGCGCGCGCCG TAGAGAGAACGGGCCGCGGCCGGATGGCCTTGGAGCGCTTGATCGTTGCCGCCGGCGCCGCGGTAATCCCGTTGATCATG GTGCAACCGGCCGTGTACCGCGACGCCGGGCTTCCGCCCCTGCGGTCGGCGTGGACCGCACTGCGCAATCCGCACTATCA CGCGAACCTGCGGTTCTTCGGCGAGCGGCTGGTCCGGGTCATGAACGAGAACGACATGCTTGAGGGCCGACTGGTGCAGC ACCTCTGGCGGTGGTCCCGCATGCTGCCCGAAGACTTTGTGCCACAGTCGAAACGGACGGCAGACGCCTAG
Upstream 100 bases:
>100_bases GGGCATCACCACCATCTGCCATGCCATTGACGGTACTAGAAGTACCCGGTACTTTGCAGTACTGTCACGAAATGGCGCAC TGAGTAGCAGGAGGCACGTC
Downstream 100 bases:
>100_bases GTCTCAGCGGCGATCACGCAACGATCCGCCCGACAGAACTACTTTTTACCCATATTGCGGATGAGCTGCTTGCCCAGCGC GCTGAGAAAGCTCTGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSQTPSVEEDSPIERTAVRLLRSSVDRSYHPEVDVDWDAPDVPGLRYVPDRYISLYGTKIFERMTEEEKIRLGRLEASAL ASWGILAESALMHPMLKLASVSDPRSATAQYALTEVADECRHSVMFGRQINTLSDRSYNPPMIARALVGITALAPLSATI FSMMLMVEEILDRLQRQTMNDETLQPRTRAIAKIHVIEEARHISYARVALARAVERTGRGRMALERLIVAAGAAVIPLIM VQPAVYRDAGLPPLRSAWTALRNPHYHANLRFFGERLVRVMNENDMLEGRLVQHLWRWSRMLPEDFVPQSKRTADA
Sequences:
>Translated_316_residues MSQTPSVEEDSPIERTAVRLLRSSVDRSYHPEVDVDWDAPDVPGLRYVPDRYISLYGTKIFERMTEEEKIRLGRLEASAL ASWGILAESALMHPMLKLASVSDPRSATAQYALTEVADECRHSVMFGRQINTLSDRSYNPPMIARALVGITALAPLSATI FSMMLMVEEILDRLQRQTMNDETLQPRTRAIAKIHVIEEARHISYARVALARAVERTGRGRMALERLIVAAGAAVIPLIM VQPAVYRDAGLPPLRSAWTALRNPHYHANLRFFGERLVRVMNENDMLEGRLVQHLWRWSRMLPEDFVPQSKRTADA >Mature_315_residues SQTPSVEEDSPIERTAVRLLRSSVDRSYHPEVDVDWDAPDVPGLRYVPDRYISLYGTKIFERMTEEEKIRLGRLEASALA SWGILAESALMHPMLKLASVSDPRSATAQYALTEVADECRHSVMFGRQINTLSDRSYNPPMIARALVGITALAPLSATIF SMMLMVEEILDRLQRQTMNDETLQPRTRAIAKIHVIEEARHISYARVALARAVERTGRGRMALERLIVAAGAAVIPLIMV QPAVYRDAGLPPLRSAWTALRNPHYHANLRFFGERLVRVMNENDMLEGRLVQHLWRWSRMLPEDFVPQSKRTADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35799; Mature: 35668
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPSVEEDSPIERTAVRLLRSSVDRSYHPEVDVDWDAPDVPGLRYVPDRYISLYGTKI CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH FERMTEEEKIRLGRLEASALASWGILAESALMHPMLKLASVSDPRSATAQYALTEVADEC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RHSVMFGRQINTLSDRSYNPPMIARALVGITALAPLSATIFSMMLMVEEILDRLQRQTMN HHHHHHHCHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DETLQPRTRAIAKIHVIEEARHISYARVALARAVERTGRGRMALERLIVAAGAAVIPLIM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VQPAVYRDAGLPPLRSAWTALRNPHYHANLRFFGERLVRVMNENDMLEGRLVQHLWRWSR HCCHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH MLPEDFVPQSKRTADA HCCHHHCCCCCCCCCC >Mature Secondary Structure SQTPSVEEDSPIERTAVRLLRSSVDRSYHPEVDVDWDAPDVPGLRYVPDRYISLYGTKI CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH FERMTEEEKIRLGRLEASALASWGILAESALMHPMLKLASVSDPRSATAQYALTEVADEC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RHSVMFGRQINTLSDRSYNPPMIARALVGITALAPLSATIFSMMLMVEEILDRLQRQTMN HHHHHHHCHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DETLQPRTRAIAKIHVIEEARHISYARVALARAVERTGRGRMALERLIVAAGAAVIPLIM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VQPAVYRDAGLPPLRSAWTALRNPHYHANLRFFGERLVRVMNENDMLEGRLVQHLWRWSR HCCHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH MLPEDFVPQSKRTADA HCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]