| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628581
Identifier: 169628581
GI number: 169628581
Start: 1500576
End: 1502036
Strand: Direct
Name: 169628581
Synonym: MAB_1490
Alternate gene names: NA
Gene position: 1500576-1502036 (Clockwise)
Preceding gene: 169628580
Following gene: 169628582
Centisome position: 29.61
GC content: 64.68
Gene sequence:
>1461_bases ATGAATGATCTGACAGTCGAAGAGCTGTTCGCGCACAACGATGACGTGCAGAAATCCCGTGCGGTCCGCCTGTTGGCCGC CAAGAATCTGGCCCCCTACATCACGCTCATGGAACGCCACCTGGACCGCAGCGCCAAAGTCTCCGAACCTCAGCTGGTGG CCAAGCTGGACCGGGACCTGAGCGCCGTCGGGCTGGGAGAACAGTCCGGGCTGGCCCTCATCAAGAGCTGGGCGAGCGAC GGGTGGCTGCACCGAGCGTCGGACGGCACCGGCCCCGATGCCGAGAACGTCTGCTCGCTGACCGAGGACGCGCGCAGCGC GCTGGCCTTTGTGCGCCGCCTGCGCCGTGCTGACACGGTGGCCACGGGCGGGTCCATTGCCGGTATCGCGGCAGGCCTCA AACGGGTGGCCACCCAGCTGGACGGCGACCCGTCACGCCTGCGCGCCGACATCGAAGCCCAGATCGCAGAACTGCAGACC CAGCTGCATGCCATCGACGACGGATATCGTCCGGAACCGGATATCGTCGATCTTGAGGACGAGACCCGGGCCATCGCATA CCAGATGGAACAAGTGATCACCGACATCGTCCGCTACGGCAGCATGCAGAACGAGATCACCGCCGGACTCATCGACGCCG CCGAGGACTCCGACTCCGGCTTCCGCGACCGCGCCCGCAGAATGTTCGCGGACTACGACGCCCTCTTCGATTCCCGCGAG CGTGCCTCTTATTCGGCCTTCACGCGGACCATCCAAGATCCGGATCAGCGAGCCGCGCTACGGAGTGATATTGCCTGTGT CGCAGAGGGTTTGCCTGATCTCGACCCCGGGCTGCGTGAGGTCATGAGGAACTTCTTCAAGCTCGTGTCTCAGCAGATCG CGGAGGTCTCCCGCATCGAACAGCGCTGCGCACAGCGCATCCGGCGGTTCTTCGCCGCCGGCACCACGGAGCAGGCTCGT GGCCGTGCGCGACAGCTCAATGACGCGCTGGCGGCCGGGCACGCTCTACTCAAGATGTCGACGGCGGACTCTCCGATCGA CGCCGAGCTACCGATCGGGCGTTCCGCCGCAGCGGCGATCGGCGCGCTGTCTTTCACCATCAAGGACACCGCGCCGCCGG TGCTCGCACAGGACGCCCCGTCGGGGCCGCTGGATTTGAGCGGGTTCTCGGCGCTGGCCACCCAGGTGGATATGGCCGCA TTGGCCGATACGGTCAACAGTGCTATTGCCAGTGGCCCAGTTTCCTTGCCCGACATGATCTCTCATGTCGAGGCCCCCTA CCTAGGTGATGTGATCGTGTTGTGGTCGCTGGCCCTCAAGCAGGACAACACTGCCGACCGCGAATCGGTAAAGGTGAAGT TCCGGTCCCTCGACGGACAGGACCGGGTGATGGAGGTACCTCAGTTGATGTTCCGTGAACCGGTGCTGGCCACCCTCGAA GAGGAGGGATCGACACTGTGA
Upstream 100 bases:
>100_bases TCGCCACACTCCCGTCGGCCCGGTAGGTTTTCCGGGCCAGTGGCTACGACGGCTGCGCGGCCCGGGGGACAAGCCGCTAG CAATGTGATGGAGGTGTGCG
Downstream 100 bases:
>100_bases CGACACAGGCTTCAGGGACCGCCCTGGGGAACATCAATTTTGACGACCTGCCGGGTGTCGAACCCGATGCCTCGGCACCG CGAATGGCCAAGGGGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MNDLTVEELFAHNDDVQKSRAVRLLAAKNLAPYITLMERHLDRSAKVSEPQLVAKLDRDLSAVGLGEQSGLALIKSWASD GWLHRASDGTGPDAENVCSLTEDARSALAFVRRLRRADTVATGGSIAGIAAGLKRVATQLDGDPSRLRADIEAQIAELQT QLHAIDDGYRPEPDIVDLEDETRAIAYQMEQVITDIVRYGSMQNEITAGLIDAAEDSDSGFRDRARRMFADYDALFDSRE RASYSAFTRTIQDPDQRAALRSDIACVAEGLPDLDPGLREVMRNFFKLVSQQIAEVSRIEQRCAQRIRRFFAAGTTEQAR GRARQLNDALAAGHALLKMSTADSPIDAELPIGRSAAAAIGALSFTIKDTAPPVLAQDAPSGPLDLSGFSALATQVDMAA LADTVNSAIASGPVSLPDMISHVEAPYLGDVIVLWSLALKQDNTADRESVKVKFRSLDGQDRVMEVPQLMFREPVLATLE EEGSTL
Sequences:
>Translated_486_residues MNDLTVEELFAHNDDVQKSRAVRLLAAKNLAPYITLMERHLDRSAKVSEPQLVAKLDRDLSAVGLGEQSGLALIKSWASD GWLHRASDGTGPDAENVCSLTEDARSALAFVRRLRRADTVATGGSIAGIAAGLKRVATQLDGDPSRLRADIEAQIAELQT QLHAIDDGYRPEPDIVDLEDETRAIAYQMEQVITDIVRYGSMQNEITAGLIDAAEDSDSGFRDRARRMFADYDALFDSRE RASYSAFTRTIQDPDQRAALRSDIACVAEGLPDLDPGLREVMRNFFKLVSQQIAEVSRIEQRCAQRIRRFFAAGTTEQAR GRARQLNDALAAGHALLKMSTADSPIDAELPIGRSAAAAIGALSFTIKDTAPPVLAQDAPSGPLDLSGFSALATQVDMAA LADTVNSAIASGPVSLPDMISHVEAPYLGDVIVLWSLALKQDNTADRESVKVKFRSLDGQDRVMEVPQLMFREPVLATLE EEGSTL >Mature_486_residues MNDLTVEELFAHNDDVQKSRAVRLLAAKNLAPYITLMERHLDRSAKVSEPQLVAKLDRDLSAVGLGEQSGLALIKSWASD GWLHRASDGTGPDAENVCSLTEDARSALAFVRRLRRADTVATGGSIAGIAAGLKRVATQLDGDPSRLRADIEAQIAELQT QLHAIDDGYRPEPDIVDLEDETRAIAYQMEQVITDIVRYGSMQNEITAGLIDAAEDSDSGFRDRARRMFADYDALFDSRE RASYSAFTRTIQDPDQRAALRSDIACVAEGLPDLDPGLREVMRNFFKLVSQQIAEVSRIEQRCAQRIRRFFAAGTTEQAR GRARQLNDALAAGHALLKMSTADSPIDAELPIGRSAAAAIGALSFTIKDTAPPVLAQDAPSGPLDLSGFSALATQVDMAA LADTVNSAIASGPVSLPDMISHVEAPYLGDVIVLWSLALKQDNTADRESVKVKFRSLDGQDRVMEVPQLMFREPVLATLE EEGSTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52760; Mature: 52760
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLTVEELFAHNDDVQKSRAVRLLAAKNLAPYITLMERHLDRSAKVSEPQLVAKLDRDL CCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCH SAVGLGEQSGLALIKSWASDGWLHRASDGTGPDAENVCSLTEDARSALAFVRRLRRADTV HHHCCCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGGSIAGIAAGLKRVATQLDGDPSRLRADIEAQIAELQTQLHAIDDGYRPEPDIVDLED CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCH ETRAIAYQMEQVITDIVRYGSMQNEITAGLIDAAEDSDSGFRDRARRMFADYDALFDSRE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHH RASYSAFTRTIQDPDQRAALRSDIACVAEGLPDLDPGLREVMRNFFKLVSQQIAEVSRIE HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRCAQRIRRFFAAGTTEQARGRARQLNDALAAGHALLKMSTADSPIDAELPIGRSAAAAI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHH GALSFTIKDTAPPVLAQDAPSGPLDLSGFSALATQVDMAALADTVNSAIASGPVSLPDMI HHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SHVEAPYLGDVIVLWSLALKQDNTADRESVKVKFRSLDGQDRVMEVPQLMFREPVLATLE HHHCCCHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHCHHHHHHH EEGSTL HCCCCC >Mature Secondary Structure MNDLTVEELFAHNDDVQKSRAVRLLAAKNLAPYITLMERHLDRSAKVSEPQLVAKLDRDL CCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCH SAVGLGEQSGLALIKSWASDGWLHRASDGTGPDAENVCSLTEDARSALAFVRRLRRADTV HHHCCCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGGSIAGIAAGLKRVATQLDGDPSRLRADIEAQIAELQTQLHAIDDGYRPEPDIVDLED CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCH ETRAIAYQMEQVITDIVRYGSMQNEITAGLIDAAEDSDSGFRDRARRMFADYDALFDSRE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHH RASYSAFTRTIQDPDQRAALRSDIACVAEGLPDLDPGLREVMRNFFKLVSQQIAEVSRIE HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QRCAQRIRRFFAAGTTEQARGRARQLNDALAAGHALLKMSTADSPIDAELPIGRSAAAAI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHH GALSFTIKDTAPPVLAQDAPSGPLDLSGFSALATQVDMAALADTVNSAIASGPVSLPDMI HHHEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SHVEAPYLGDVIVLWSLALKQDNTADRESVKVKFRSLDGQDRVMEVPQLMFREPVLATLE HHHCCCHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHCHHHHHHH EEGSTL HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA