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The map label for this gene is clpS [H]

Identifier: 169628566

GI number: 169628566

Start: 1489028

End: 1489330

Strand: Direct

Name: clpS [H]

Synonym: MAB_1475

Alternate gene names: 169628566

Gene position: 1489028-1489330 (Clockwise)

Preceding gene: 169628560

Following gene: 169628567

Centisome position: 29.39

GC content: 61.72

Gene sequence:

>303_bases
ATGGGTGCGCCGGCGCGAGCCTTGCCAGGGACTACAGCGGAGAGGTCTGTCGAACATGTCGACGAGACTCAGTCGCCGTG
GGTCACCATTGTCTGGGACGATCCGGTGAACCTGATGAACTATGTCGCCTACGTGTTCCAGCAGCTATTCGGCTACAGCG
AGACCGAGGCCACCAACCTGATGTTGCAGGTCCATCATGAGGGCAAGGCCGTGGTGTCCTGCGGTGCTCGCGAGTCGATG
GAGATCGACGTCAGCAAGTTGCACGCCGCGGGCCTGTGGGCCACCCTGCAGCAGGATCGATGA

Upstream 100 bases:

>100_bases
GAGATCAGGCGGTGTGAGCGGGTGCTCGACGGCGTCGCGTGGTCGCGGGAAACTCCGAACTTCGTGCTGACAGACTCGGC
AGTCCCGGTATTCTGGGGCC

Downstream 100 bases:

>100_bases
GTCACTGATCCGTGCGAAAGTGGAAGCGCGTCAACGCCTCCGATGGAATTCGGTTGCGTTCGGAGATGGAGCCGCACGAG
GCGGCTCTGGTGCAATCCAT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MGAPARALPGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNLMLQVHHEGKAVVSCGARESM
EIDVSKLHAAGLWATLQQDR

Sequences:

>Translated_100_residues
MGAPARALPGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNLMLQVHHEGKAVVSCGARESM
EIDVSKLHAAGLWATLQQDR
>Mature_99_residues
GAPARALPGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNLMLQVHHEGKAVVSCGARESME
IDVSKLHAAGLWATLQQDR

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11103; Mature: 10971

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPARALPGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNL
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEE
MLQVHHEGKAVVSCGARESMEIDVSKLHAAGLWATLQQDR
EEEEECCCCEEEECCCCCCCEEHHHHHHHHHHHEEECCCC
>Mature Secondary Structure 
GAPARALPGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNL
CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEE
MLQVHHEGKAVVSCGARESMEIDVSKLHAAGLWATLQQDR
EEEEECCCCEEEECCCCCCCEEHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA