Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169628567

Identifier: 169628567

GI number: 169628567

Start: 1489342

End: 1489929

Strand: Direct

Name: 169628567

Synonym: MAB_1476

Alternate gene names: NA

Gene position: 1489342-1489929 (Clockwise)

Preceding gene: 169628566

Following gene: 169628568

Centisome position: 29.39

GC content: 63.78

Gene sequence:

>588_bases
GTGCGAAAGTGGAAGCGCGTCAACGCCTCCGATGGAATTCGGTTGCGTTCGGAGATGGAGCCGCACGAGGCGGCTCTGGT
GCAATCCATGGTGACATCCATGCTTGCGATGCTGGACGAGCGCGAATCGTCGGCACCCAGTGATGAACTGGCCCAGCTGA
CGGGTATCCGCACCGGAAACACCGAGGCCCCCACCGATGTCACCCTGGGGCGGCTGCTACCGGACTTTCACCGGCCGGAC
CAGGACGGCACCAGCAGCATCGAAGCGGTCAGCGGACTCAACAGCGCCCTACGCAGCCTGTACGAGCCGGAGATCATCGA
CGCCAAACGCGAGGCCGGGCAACGGTTGTTGCGGACGCTTCCCGCGGACGGCGGGCGATTCGAACTGTCCGAAACGGACG
CGCAGGCATGGTTGACCGCGCTCAATGATGTGCGGTTGGCGCTGGGCGCCATGCTGGGGATCGATAGCGAAGGGCCTCAG
GAGCTGGCCGTCGACGACCCCATGGCCGGACATATGGACATCTACCATTGGCTGACCGTGATGCAGGAGCTGCTGGTGCT
CGCGTTGATGGGTAAATCGGCGGTATGA

Upstream 100 bases:

>100_bases
TGTCCTGCGGTGCTCGCGAGTCGATGGAGATCGACGTCAGCAAGTTGCACGCCGCGGGCCTGTGGGCCACCCTGCAGCAG
GATCGATGAGTCACTGATCC

Downstream 100 bases:

>100_bases
GCCTGTTCTCTGGGGCGATCACCGATGTTCCGGGAATACTCGTGGGTCATCACCAGCGGGTGGACGCCGATGCGAGCCTC
GGAGCAGGCTGGGCCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRKWKRVNASDGIRLRSEMEPHEAALVQSMVTSMLAMLDERESSAPSDELAQLTGIRTGNTEAPTDVTLGRLLPDFHRPD
QDGTSSIEAVSGLNSALRSLYEPEIIDAKREAGQRLLRTLPADGGRFELSETDAQAWLTALNDVRLALGAMLGIDSEGPQ
ELAVDDPMAGHMDIYHWLTVMQELLVLALMGKSAV

Sequences:

>Translated_195_residues
MRKWKRVNASDGIRLRSEMEPHEAALVQSMVTSMLAMLDERESSAPSDELAQLTGIRTGNTEAPTDVTLGRLLPDFHRPD
QDGTSSIEAVSGLNSALRSLYEPEIIDAKREAGQRLLRTLPADGGRFELSETDAQAWLTALNDVRLALGAMLGIDSEGPQ
ELAVDDPMAGHMDIYHWLTVMQELLVLALMGKSAV
>Mature_195_residues
MRKWKRVNASDGIRLRSEMEPHEAALVQSMVTSMLAMLDERESSAPSDELAQLTGIRTGNTEAPTDVTLGRLLPDFHRPD
QDGTSSIEAVSGLNSALRSLYEPEIIDAKREAGQRLLRTLPADGGRFELSETDAQAWLTALNDVRLALGAMLGIDSEGPQ
ELAVDDPMAGHMDIYHWLTVMQELLVLALMGKSAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1332 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018561 [H]

Pfam domain/function: PF09438 DUF2017 [H]

EC number: NA

Molecular weight: Translated: 21325; Mature: 21325

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKWKRVNASDGIRLRSEMEPHEAALVQSMVTSMLAMLDERESSAPSDELAQLTGIRTGN
CCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
TEAPTDVTLGRLLPDFHRPDQDGTSSIEAVSGLNSALRSLYEPEIIDAKREAGQRLLRTL
CCCCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PADGGRFELSETDAQAWLTALNDVRLALGAMLGIDSEGPQELAVDDPMAGHMDIYHWLTV
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
MQELLVLALMGKSAV
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKWKRVNASDGIRLRSEMEPHEAALVQSMVTSMLAMLDERESSAPSDELAQLTGIRTGN
CCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
TEAPTDVTLGRLLPDFHRPDQDGTSSIEAVSGLNSALRSLYEPEIIDAKREAGQRLLRTL
CCCCCHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
PADGGRFELSETDAQAWLTALNDVRLALGAMLGIDSEGPQELAVDDPMAGHMDIYHWLTV
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
MQELLVLALMGKSAV
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]