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The map label for this gene is glgB [H]

Identifier: 169628558

GI number: 169628558

Start: 1475773

End: 1477980

Strand: Reverse

Name: glgB [H]

Synonym: MAB_1467c

Alternate gene names: 169628558

Gene position: 1477980-1475773 (Counterclockwise)

Preceding gene: 169628559

Following gene: 169628557

Centisome position: 29.17

GC content: 64.18

Gene sequence:

>2208_bases
GTGAGCCCATCGACCGCCCCTTTGCAACCGGATGCCGCGGACATCGCGCGGCTGCTGGCAGGCACCCACCACAACCCTCA
TTCAATCCTGGGCGCGCACGAGTATCCGCGCTCGAAGAGCAAGGGATATACCGTCATTCGCGCGTTCAAACCGGGCGCCA
GTGCCGTCGCGGCGGTGGTCGGTGACGCGATTCATCACATGACGCACCTTGGTTCGGGGCTGTTCGCCGTGGCGCTGCCC
TTCCTGAATCTCTTGGACTATCGCCTCGATGTCGAATACGGCGGCACATCGCTCGTCATCGCCGACGCCTACCGGTTTCT
GCCCACTCTGGGCGAGGTGGACCTGCACCTGTTCAACGAGGGCCGCCACGAACGACTCTGGGAGATCCTCGGTGCGCATC
CGCGGTCCTTCGTCACCGCCGACGGCGAGGTCAGCGGCGTCTCCTTCGCGGTCTGGGCGCCCAATGCGCGTGGCGTCTCG
GTGATCGGTGATTTCAATGGGTGGAACGGAAATGACGCACCGATGCGCACACTCGGCTCCTCGGGAGTCTGGGAGCTGTT
CTGGCCGGGCATGACGCTCGGCGCGCTGTACAAGTTCCGCGTGCACGGCGCCGACGGATCGGTGACCGACCGTGCCGACC
CCTTCGCGTTCGCCACCGAGTTGCCGCCGGCCACCGCGTCGCGGGTAAGCACCACGTCGTATTCCTGGGAAGACGGCGAA
TGGATGTCCCAGCGCGCTTCGCGCAATCCGGTATTCGAGCCGATGAGCACCTACGAAGTGCATCTGGCATCGTGGCGCCC
CGGACTGAACTATCGAGATCTGGCCCGCGAGCTCACCGAATACGTACTGGCACAAGGTTTCACTCACGTTGAGCTGCTAC
CGGTGGCCGAACACCCCTTCGGCGGGTCCTGGGGGTATCAGGTGACCTCGTACTACGCTCCCACCTCACGGCTCGGCACA
CCCGATGACTTCCGGTATCTGGTCGATGCCCTGCACCGCGCGGGCATCGGGGTACTCGTCGATTGGGTGCCCGCGCACTT
CCCCAAGGACGCCTGGGCATTGGCCCGCTTCGACGGCACACCGCTGTATGAACACGCCGATCCGCACCGGGCCGAGCAAC
TGGACTGGGGAACATATGTTTTCGATTTCGGACGCCCCGAGGTACGCAATTTCCTTGTCGCCAATGCACTGTTCTGGCTC
GACCAGTTCCACATCGACGGGCTGCGTGTCGACGCCGTCGCATCGATGCTCTATCTCGACTACTCACGGCCCCAGGGCGG
CTGGACTCCGAACATCCACGGGGGCCGCGAGAACCTCGAGGCCGTCCAGTTCCTGCAGGAGATGAACGCCACGGTGCACA
AGCTGCATCCCGGGATCGTCACCGTGGCCGAGGAGTCCACCTCTTGGCCCGGCGTTACTCGCGCAACTAGCCTTGGCGGC
CTTGGCTTTTCCATGAAATGGAATATGGGCTGGATGCACGACACCCTGGGGTACCTGGGCCGCGATCCCATCCACCGTAG
CTTTCACCACCACGAGATGACCTTCTCGATGCTGTACGCGTTCAGCGAGAATTTCGTGTTGCCCATCAGTCATGACGAGG
TGGTGCACGGCAAGGGCACACTATGGACCCGGATACCGGGCGACGGCCATGCCAAGGCTGCCGGACTTCGCTGCCTACTG
GCGTACATGTGGGCACACCCGGGAAAGCAGCTGTTGTTCATGGGCCAGGAGTTCGGGCAACGCGCCGAATGGTCCGACGA
GCGCGGTGTCGACTGGTTCCAGTTGAGCGAAGACGGATACTCGGCGGGAATCGCGGCGCTGACGGCCGACCTGAACACGG
TGTACCGAGAGCGCCGCGCACTGTGGTCACAGGACACCGCGCCGCAAGGGTATTCATGGATCGACGCCAATGACTCGGCC
AACAACGTGCTGAGCTTTCTACGTTTCGGCGACGACGGCTCGGTGCTGGCATGCATCTTCAATTTCGCCGGCGTCGAGCA
CAGCAGCTACCGCGTGGGGTTGCCGCTCACCGGCCGCTGGCGCGAGGTCATCAATACCGACGCGCTGCAGTATCGCGGCG
GCGGCGTGGGAAATCTCGGGGAGGTCATCGCCTCGGCGAACCCGTGGCACGGTCGCCCCGCCTCTGCCACGCTGGCACTG
CCGCCGGCCGCTGCCATCTGGCTAGAACCCGTCTCGGACCGTCTCTAG

Upstream 100 bases:

>100_bases
AAGCCAACTACGTGCGGCTCGATCCGCCCAAGGCCGTAGCGCACATCCTCAACCTGCCGCAGGTTCGCGAACCCGTACGA
ACGCAGCTGGTGTACCGCCC

Downstream 100 bases:

>100_bases
AAAACATTAGGATGCGCTAAACGCACGCTCGCGTATTTCAAAGGGGTGGCTTGATGTCCAAACGCTGGGTAGCACTGTTG
GTGGGATTGGTGCTGGTCAT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 735; Mature: 734

Protein sequence:

>735_residues
MSPSTAPLQPDAADIARLLAGTHHNPHSILGAHEYPRSKSKGYTVIRAFKPGASAVAAVVGDAIHHMTHLGSGLFAVALP
FLNLLDYRLDVEYGGTSLVIADAYRFLPTLGEVDLHLFNEGRHERLWEILGAHPRSFVTADGEVSGVSFAVWAPNARGVS
VIGDFNGWNGNDAPMRTLGSSGVWELFWPGMTLGALYKFRVHGADGSVTDRADPFAFATELPPATASRVSTTSYSWEDGE
WMSQRASRNPVFEPMSTYEVHLASWRPGLNYRDLARELTEYVLAQGFTHVELLPVAEHPFGGSWGYQVTSYYAPTSRLGT
PDDFRYLVDALHRAGIGVLVDWVPAHFPKDAWALARFDGTPLYEHADPHRAEQLDWGTYVFDFGRPEVRNFLVANALFWL
DQFHIDGLRVDAVASMLYLDYSRPQGGWTPNIHGGRENLEAVQFLQEMNATVHKLHPGIVTVAEESTSWPGVTRATSLGG
LGFSMKWNMGWMHDTLGYLGRDPIHRSFHHHEMTFSMLYAFSENFVLPISHDEVVHGKGTLWTRIPGDGHAKAAGLRCLL
AYMWAHPGKQLLFMGQEFGQRAEWSDERGVDWFQLSEDGYSAGIAALTADLNTVYRERRALWSQDTAPQGYSWIDANDSA
NNVLSFLRFGDDGSVLACIFNFAGVEHSSYRVGLPLTGRWREVINTDALQYRGGGVGNLGEVIASANPWHGRPASATLAL
PPAAAIWLEPVSDRL

Sequences:

>Translated_735_residues
MSPSTAPLQPDAADIARLLAGTHHNPHSILGAHEYPRSKSKGYTVIRAFKPGASAVAAVVGDAIHHMTHLGSGLFAVALP
FLNLLDYRLDVEYGGTSLVIADAYRFLPTLGEVDLHLFNEGRHERLWEILGAHPRSFVTADGEVSGVSFAVWAPNARGVS
VIGDFNGWNGNDAPMRTLGSSGVWELFWPGMTLGALYKFRVHGADGSVTDRADPFAFATELPPATASRVSTTSYSWEDGE
WMSQRASRNPVFEPMSTYEVHLASWRPGLNYRDLARELTEYVLAQGFTHVELLPVAEHPFGGSWGYQVTSYYAPTSRLGT
PDDFRYLVDALHRAGIGVLVDWVPAHFPKDAWALARFDGTPLYEHADPHRAEQLDWGTYVFDFGRPEVRNFLVANALFWL
DQFHIDGLRVDAVASMLYLDYSRPQGGWTPNIHGGRENLEAVQFLQEMNATVHKLHPGIVTVAEESTSWPGVTRATSLGG
LGFSMKWNMGWMHDTLGYLGRDPIHRSFHHHEMTFSMLYAFSENFVLPISHDEVVHGKGTLWTRIPGDGHAKAAGLRCLL
AYMWAHPGKQLLFMGQEFGQRAEWSDERGVDWFQLSEDGYSAGIAALTADLNTVYRERRALWSQDTAPQGYSWIDANDSA
NNVLSFLRFGDDGSVLACIFNFAGVEHSSYRVGLPLTGRWREVINTDALQYRGGGVGNLGEVIASANPWHGRPASATLAL
PPAAAIWLEPVSDRL
>Mature_734_residues
SPSTAPLQPDAADIARLLAGTHHNPHSILGAHEYPRSKSKGYTVIRAFKPGASAVAAVVGDAIHHMTHLGSGLFAVALPF
LNLLDYRLDVEYGGTSLVIADAYRFLPTLGEVDLHLFNEGRHERLWEILGAHPRSFVTADGEVSGVSFAVWAPNARGVSV
IGDFNGWNGNDAPMRTLGSSGVWELFWPGMTLGALYKFRVHGADGSVTDRADPFAFATELPPATASRVSTTSYSWEDGEW
MSQRASRNPVFEPMSTYEVHLASWRPGLNYRDLARELTEYVLAQGFTHVELLPVAEHPFGGSWGYQVTSYYAPTSRLGTP
DDFRYLVDALHRAGIGVLVDWVPAHFPKDAWALARFDGTPLYEHADPHRAEQLDWGTYVFDFGRPEVRNFLVANALFWLD
QFHIDGLRVDAVASMLYLDYSRPQGGWTPNIHGGRENLEAVQFLQEMNATVHKLHPGIVTVAEESTSWPGVTRATSLGGL
GFSMKWNMGWMHDTLGYLGRDPIHRSFHHHEMTFSMLYAFSENFVLPISHDEVVHGKGTLWTRIPGDGHAKAAGLRCLLA
YMWAHPGKQLLFMGQEFGQRAEWSDERGVDWFQLSEDGYSAGIAALTADLNTVYRERRALWSQDTAPQGYSWIDANDSAN
NVLSFLRFGDDGSVLACIFNFAGVEHSSYRVGLPLTGRWREVINTDALQYRGGGVGNLGEVIASANPWHGRPASATLALP
PAAAIWLEPVSDRL

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=678, Percent_Identity=28.1710914454277, Blast_Score=189, Evalue=8e-48,
Organism=Escherichia coli, GI1789839, Length=730, Percent_Identity=47.2602739726027, Blast_Score=651, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=637, Percent_Identity=25.4317111459969, Blast_Score=162, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI32564391, Length=562, Percent_Identity=24.9110320284698, Blast_Score=141, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320826, Length=646, Percent_Identity=24.922600619195, Blast_Score=163, Evalue=9e-41,
Organism=Drosophila melanogaster, GI28573410, Length=653, Percent_Identity=27.1056661562021, Blast_Score=172, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 81274; Mature: 81143

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSTAPLQPDAADIARLLAGTHHNPHSILGAHEYPRSKSKGYTVIRAFKPGASAVAAVV
CCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
GDAIHHMTHLGSGLFAVALPFLNLLDYRLDVEYGGTSLVIADAYRFLPTLGEVDLHLFNE
HHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEHHHHHHCCCCCEEEEEECC
GRHERLWEILGAHPRSFVTADGEVSGVSFAVWAPNARGVSVIGDFNGWNGNDAPMRTLGS
CHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCC
SGVWELFWPGMTLGALYKFRVHGADGSVTDRADPFAFATELPPATASRVSTTSYSWEDGE
CCCEEEECCCCHHCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCH
WMSQRASRNPVFEPMSTYEVHLASWRPGLNYRDLARELTEYVLAQGFTHVELLPVAEHPF
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GGSWGYQVTSYYAPTSRLGTPDDFRYLVDALHRAGIGVLVDWVPAHFPKDAWALARFDGT
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECHHCCCCCCCEEEEECCCC
PLYEHADPHRAEQLDWGTYVFDFGRPEVRNFLVANALFWLDQFHIDGLRVDAVASMLYLD
CCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHEE
YSRPQGGWTPNIHGGRENLEAVQFLQEMNATVHKLHPGIVTVAEESTSWPGVTRATSLGG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCHHHCCCC
LGFSMKWNMGWMHDTLGYLGRDPIHRSFHHHEMTFSMLYAFSENFVLPISHDEVVHGKGT
CCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCE
LWTRIPGDGHAKAAGLRCLLAYMWAHPGKQLLFMGQEFGQRAEWSDERGVDWFQLSEDGY
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCCCEEEECCCCC
SAGIAALTADLNTVYRERRALWSQDTAPQGYSWIDANDSANNVLSFLRFGDDGSVLACIF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEHEEH
NFAGVEHSSYRVGLPLTGRWREVINTDALQYRGGGVGNLGEVIASANPWHGRPASATLAL
HHHCCCCCCEEECCCCCCHHHHHHCCCHHEECCCCCCCHHHHHHCCCCCCCCCCCCEEEC
PPAAAIWLEPVSDRL
CCCCEEEECCCCCCC
>Mature Secondary Structure 
SPSTAPLQPDAADIARLLAGTHHNPHSILGAHEYPRSKSKGYTVIRAFKPGASAVAAVV
CCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
GDAIHHMTHLGSGLFAVALPFLNLLDYRLDVEYGGTSLVIADAYRFLPTLGEVDLHLFNE
HHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEHHHHHHCCCCCEEEEEECC
GRHERLWEILGAHPRSFVTADGEVSGVSFAVWAPNARGVSVIGDFNGWNGNDAPMRTLGS
CHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCC
SGVWELFWPGMTLGALYKFRVHGADGSVTDRADPFAFATELPPATASRVSTTSYSWEDGE
CCCEEEECCCCHHCEEEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCH
WMSQRASRNPVFEPMSTYEVHLASWRPGLNYRDLARELTEYVLAQGFTHVELLPVAEHPF
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
GGSWGYQVTSYYAPTSRLGTPDDFRYLVDALHRAGIGVLVDWVPAHFPKDAWALARFDGT
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECHHCCCCCCCEEEEECCCC
PLYEHADPHRAEQLDWGTYVFDFGRPEVRNFLVANALFWLDQFHIDGLRVDAVASMLYLD
CCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHEE
YSRPQGGWTPNIHGGRENLEAVQFLQEMNATVHKLHPGIVTVAEESTSWPGVTRATSLGG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCHHHCCCC
LGFSMKWNMGWMHDTLGYLGRDPIHRSFHHHEMTFSMLYAFSENFVLPISHDEVVHGKGT
CCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCE
LWTRIPGDGHAKAAGLRCLLAYMWAHPGKQLLFMGQEFGQRAEWSDERGVDWFQLSEDGY
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCCCEEEECCCCC
SAGIAALTADLNTVYRERRALWSQDTAPQGYSWIDANDSANNVLSFLRFGDDGSVLACIF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEHEEH
NFAGVEHSSYRVGLPLTGRWREVINTDALQYRGGGVGNLGEVIASANPWHGRPASATLAL
HHHCCCCCCEEECCCCCCHHHHHHCCCHHEECCCCCCCHHHHHHCCCCCCCCCCCCEEEC
PPAAAIWLEPVSDRL
CCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA