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The map label for this gene is atpF

Identifier: 169628540

GI number: 169628540

Start: 1452868

End: 1453401

Strand: Direct

Name: atpF

Synonym: MAB_1449

Alternate gene names: 169628540

Gene position: 1452868-1453401 (Clockwise)

Preceding gene: 169628539

Following gene: 169628541

Centisome position: 28.67

GC content: 64.23

Gene sequence:

>534_bases
ATGGGTGAATTGCACAGTGTCGCTTCTGCCGTCACGGCAGTCGCGGCGGAAGCCGCCGAAGAGGGTGGGAAGCAGAACAA
CTTCCTCATCCCCAACGGCACCTTCTTTGTCGTCCTGGCGATCTTCCTGATCGTCCTGGCGGTCATCGGAACCTTCGTGG
TGCCGCCGATCCAAAAGGTGCTGAAGGCACGCGAGGACATGGTCACCAAGACGGCCGAGGACAACCGGAACGCCGCTGAG
CAATTCACCGCCGCCGAGGCTGACTACAAAGATGAGCTGGCCAAGGCGCGCGGTGCCGCAACGGCGGTGCGTGACGAGGC
CAGGGCCGAGGGGCGCGGCATTCTTGAGGACATGCGTCAGCGAGCCAACGCAGAAGCAACTGCCGTGACTGAAACGGCAG
CAGCGGAGTTGGCCCGTCAGGGCGAGGTAACCGCCGGGGAGCTGGCGACGAACGTCGACAGCTTGTCCCGGACCCTCGCC
GAACGCGTTCTCGGCGTGAGCCTTTCGGAACCAGCGAACGCAGGGCGAGGCTAA

Upstream 100 bases:

>100_bases
CGTTCTTCATCACCGTCGGTCTGGTTGAGGCTGCGTACTTCATCAACCTGGCCTTCATGGCGTTGTTCGTCTTCGCGACT
CCCGGCGCCAGCTAATCGGC

Downstream 100 bases:

>100_bases
ACACAGATGTCGACATTTATCGGACAGCTCATCGGTTTCGCTGTCATTGTGTTCCTGGTGGTCAAGTACGTGGTGCCGCC
GGTGCGCACGTTGATGGCCA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGELHSVASAVTAVAAEAAEEGGKQNNFLIPNGTFFVVLAIFLIVLAVIGTFVVPPIQKVLKAREDMVTKTAEDNRNAAE
QFTAAEADYKDELAKARGAATAVRDEARAEGRGILEDMRQRANAEATAVTETAAAELARQGEVTAGELATNVDSLSRTLA
ERVLGVSLSEPANAGRG

Sequences:

>Translated_177_residues
MGELHSVASAVTAVAAEAAEEGGKQNNFLIPNGTFFVVLAIFLIVLAVIGTFVVPPIQKVLKAREDMVTKTAEDNRNAAE
QFTAAEADYKDELAKARGAATAVRDEARAEGRGILEDMRQRANAEATAVTETAAAELARQGEVTAGELATNVDSLSRTLA
ERVLGVSLSEPANAGRG
>Mature_176_residues
GELHSVASAVTAVAAEAAEEGGKQNNFLIPNGTFFVVLAIFLIVLAVIGTFVVPPIQKVLKAREDMVTKTAEDNRNAAEQ
FTAAEADYKDELAKARGAATAVRDEARAEGRGILEDMRQRANAEATAVTETAAAELARQGEVTAGELATNVDSLSRTLAE
RVLGVSLSEPANAGRG

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_MYCA9 (B1MLV8)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001702189.1
- EnsemblBacteria:   EBMYCT00000008084
- GeneID:   5963970
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_1449
- GeneTree:   EBGT00050000016868
- HOGENOM:   HBG565494
- OMA:   ADNRKSA
- ProtClustDB:   PRK05759
- BioCyc:   MABS561007:MAB_1449-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18525; Mature: 18394

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21de92d8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELHSVASAVTAVAAEAAEEGGKQNNFLIPNGTFFVVLAIFLIVLAVIGTFVVPPIQKV
CCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH
LKAREDMVTKTAEDNRNAAEQFTAAEADYKDELAKARGAATAVRDEARAEGRGILEDMRQ
HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RANAEATAVTETAAAELARQGEVTAGELATNVDSLSRTLAERVLGVSLSEPANAGRG
HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
>Mature Secondary Structure 
GELHSVASAVTAVAAEAAEEGGKQNNFLIPNGTFFVVLAIFLIVLAVIGTFVVPPIQKV
CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH
LKAREDMVTKTAEDNRNAAEQFTAAEADYKDELAKARGAATAVRDEARAEGRGILEDMRQ
HHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RANAEATAVTETAAAELARQGEVTAGELATNVDSLSRTLAERVLGVSLSEPANAGRG
HHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA