| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is thrB
Identifier: 169628528
GI number: 169628528
Start: 1442246
End: 1443166
Strand: Direct
Name: thrB
Synonym: MAB_1437
Alternate gene names: 169628528
Gene position: 1442246-1443166 (Clockwise)
Preceding gene: 169628527
Following gene: 169628529
Centisome position: 28.46
GC content: 64.93
Gene sequence:
>921_bases GTGAGCGAGGTGCTGCCCGCGGGGCTGGCCACCACGGTCCTGGTGCCCGCATCGAGTGCGAACCTGGGCCCGGGCTTCGA CAGCCTCGGGATCGCACTGTCGCTGTACGACGAGATCGAGGTCAATACAACCGAATCCGGTCTCAAGGTGGCCGTCGAGG GTCAGGGCGCCGGAGAGGTTCCGCTCGACGGTAGCCACCTCGTTGTGCGTGCGATCGAGCGCGGGCTCGCTGCCGGTGGA GCTGCCGCCCCAGGCCTGATTGTCCAGTGCCACAACAAAATTCCGCACTCGCGAGGTCTGGGATCGTCGGCCGCGGCAGC AGTAGCCGGTCTGGGTGTGGCCAATGGGTTGCTTGCCAAGGCCGGGCGCGCGGTGCTTTCCGACGACGTGCTGGTGCAGC TGGCGTCGGAGTTCGAGGGACATCCGGACAACGCCGCGGCCAGCGTGCTAGGCGGTGCCGTGGTGTCATGGTCGGAGACG TCGGGGGCGACCCCGATTTATGCCGCTACCCGCCTCGATGTGCATCCCGATATCAAAATTGTCGCGGCCATTCCCGAGGA GCAGTCCTCCACTGCGCACACTCGGGTATTGCTGCCCCAAGCTGTCACACATGTAGATGCTCGTTTTAATATTAGCCGTG TCGCTCTGCTGACCGTCGCTCTCACCGCGCGGCCGGACCTGCTCATGACGGCTACCGAGGATCGGTTGCACCAACCGCAG CGAGCGTCGGCGATGCCGGCGTCCGCGGATGTCCTGGCGTACCTGCGGAGCCAGGGTGTCGCGGCCGTCCTTTCGGGTGC TGGACCTGCGGTGTTGGCGTTGACAACCGTCGATCTGCCCGATTCGGCGGTGAAATACGCTGAAGATCAAGGTTTCTCAC TGGTAGCCATGGCTGTGTCGGCGGGTGTGTCGGTTCGATAG
Upstream 100 bases:
>100_bases GCAACGGCCTGAAGGATCCCGACAATGCGCTGAGCGGAATGCCCGAGGTGACTCCCATCCCGGTCCAGGCGAGTGCCGTC GCCGAGGCGCTGGAACTGGC
Downstream 100 bases:
>100_bases CCGACGTTATGGCTGGTGAGCCCGGGGGACTCGCCGGGGGTGCTGGTTGCTTGATGCTCGGCCGGGGGTTATCCTCGATA TCAGTCCCAGCAATTGCAGC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSEVLPAGLATTVLVPASSANLGPGFDSLGIALSLYDEIEVNTTESGLKVAVEGQGAGEVPLDGSHLVVRAIERGLAAGG AAAPGLIVQCHNKIPHSRGLGSSAAAAVAGLGVANGLLAKAGRAVLSDDVLVQLASEFEGHPDNAAASVLGGAVVSWSET SGATPIYAATRLDVHPDIKIVAAIPEEQSSTAHTRVLLPQAVTHVDARFNISRVALLTVALTARPDLLMTATEDRLHQPQ RASAMPASADVLAYLRSQGVAAVLSGAGPAVLALTTVDLPDSAVKYAEDQGFSLVAMAVSAGVSVR
Sequences:
>Translated_306_residues MSEVLPAGLATTVLVPASSANLGPGFDSLGIALSLYDEIEVNTTESGLKVAVEGQGAGEVPLDGSHLVVRAIERGLAAGG AAAPGLIVQCHNKIPHSRGLGSSAAAAVAGLGVANGLLAKAGRAVLSDDVLVQLASEFEGHPDNAAASVLGGAVVSWSET SGATPIYAATRLDVHPDIKIVAAIPEEQSSTAHTRVLLPQAVTHVDARFNISRVALLTVALTARPDLLMTATEDRLHQPQ RASAMPASADVLAYLRSQGVAAVLSGAGPAVLALTTVDLPDSAVKYAEDQGFSLVAMAVSAGVSVR >Mature_305_residues SEVLPAGLATTVLVPASSANLGPGFDSLGIALSLYDEIEVNTTESGLKVAVEGQGAGEVPLDGSHLVVRAIERGLAAGGA AAPGLIVQCHNKIPHSRGLGSSAAAAVAGLGVANGLLAKAGRAVLSDDVLVQLASEFEGHPDNAAASVLGGAVVSWSETS GATPIYAATRLDVHPDIKIVAAIPEEQSSTAHTRVLLPQAVTHVDARFNISRVALLTVALTARPDLLMTATEDRLHQPQR ASAMPASADVLAYLRSQGVAAVLSGAGPAVLALTTVDLPDSAVKYAEDQGFSLVAMAVSAGVSVR
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily
Homologues:
Organism=Escherichia coli, GI1786184, Length=318, Percent_Identity=28.3018867924528, Blast_Score=72, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6321814, Length=323, Percent_Identity=33.1269349845201, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_MYCA9 (B1MLU6)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001702177.1 - ProteinModelPortal: B1MLU6 - SMR: B1MLU6 - EnsemblBacteria: EBMYCT00000006107 - GeneID: 5963959 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_1437 - GeneTree: EBGT00050000016145 - HOGENOM: HBG646290 - OMA: FDCLGAA - ProtClustDB: PRK01212 - BioCyc: MABS561007:MAB_1437-MONOMER - GO: GO:0005737 - HAMAP: MF_00384 - InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.230.10 - PIRSF: PIRSF000676 - PRINTS: PR00958 - TIGRFAMs: TIGR00191
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =2.7.1.39
Molecular weight: Translated: 30847; Mature: 30716
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVLPAGLATTVLVPASSANLGPGFDSLGIALSLYDEIEVNTTESGLKVAVEGQGAGEV CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCC PLDGSHLVVRAIERGLAAGGAAAPGLIVQCHNKIPHSRGLGSSAAAAVAGLGVANGLLAK CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGRAVLSDDVLVQLASEFEGHPDNAAASVLGGAVVSWSETSGATPIYAATRLDVHPDIKI CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCEEE VAAIPEEQSSTAHTRVLLPQAVTHVDARFNISRVALLTVALTARPDLLMTATEDRLHQPQ EEECCCCCCCCCCEEEECHHHHHHHHCCCCHHHEEEEEEEECCCCCEEEEECHHHHCCCC RASAMPASADVLAYLRSQGVAAVLSGAGPAVLALTTVDLPDSAVKYAEDQGFSLVAMAVS HHCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCEEEEEEHH AGVSVR CCCCCC >Mature Secondary Structure SEVLPAGLATTVLVPASSANLGPGFDSLGIALSLYDEIEVNTTESGLKVAVEGQGAGEV CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCC PLDGSHLVVRAIERGLAAGGAAAPGLIVQCHNKIPHSRGLGSSAAAAVAGLGVANGLLAK CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AGRAVLSDDVLVQLASEFEGHPDNAAASVLGGAVVSWSETSGATPIYAATRLDVHPDIKI CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCEEE VAAIPEEQSSTAHTRVLLPQAVTHVDARFNISRVALLTVALTARPDLLMTATEDRLHQPQ EEECCCCCCCCCCEEEECHHHHHHHHCCCCHHHEEEEEEEECCCCCEEEEECHHHHCCCC RASAMPASADVLAYLRSQGVAAVLSGAGPAVLALTTVDLPDSAVKYAEDQGFSLVAMAVS HHCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCEEEEEEHH AGVSVR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA