| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is cyp130 [H]
Identifier: 169628497
GI number: 169628497
Start: 1408935
End: 1410176
Strand: Reverse
Name: cyp130 [H]
Synonym: MAB_1406c
Alternate gene names: 169628497
Gene position: 1410176-1408935 (Counterclockwise)
Preceding gene: 169628498
Following gene: 169628493
Centisome position: 27.83
GC content: 63.12
Gene sequence:
>1242_bases ATGTCAGTCGATGTGTCTCATACCGTTGCGCCGCGCTACGTTCCCGGAACGGCCGACAATTGGACCAACCCATGGCCGAT GTACGCGGCGCTGCGCGACCACGACCCGGTGCATCACGTGGTGCCCGAGTACACGCCCGACCAGGACTACTACGTGCTCA CCAGGCATGCCGACGTCTACGAAGCAGCGCGCGACTGGGAAACGTTCTCGTCTGCCCGGGGGCTCACCGTCACATACGGC GACCTGGAGAAAACCGGCATGGGCGACAACCCGCCCATGGTCATGCAGGACCCACCCACGCACACCGAGTTCCGCAAGCT GGTCTCACGCGGTTTCACCCCGCGCCAAGTTACCGCCGTAGAACCGAAGGTCCGCGAGTTTGTGGTGCAGCGCCTCGAGC GACTGAAAGAACGCGGCGAGGGCGATATCGTCGTCGAACTCTTCAAGCCCCTGCCCTCGATGGTCGTGGCGCACTATCTG GGAGTACCCGAGGAAGACCGCACCCAGTTTGACGCCTGGACCGACGGCATCGTCGCAGCAGCCTCCGGTGGCGCCATCGA CATCGAAGCCATGCAGGGCGAGGTCGCCCAGACCATCGGTGAACTGATGATGTACTTCACCGGTCTCATCGAACGACGGC GCGCAGAGCCCGAAGACGACACCGTGTCGCACCTGGTCGCCGCGGGTGTCGGAGCGGACGGAGACATCAGCGGGACGCTC CAGATCCTCGGCTTCGCGTTCACCATGGTGACGGGCGGCAACGATACGACCACCGGAATGCTGGGCGGCGCAATACAACT GCTACATCAGAACCCCGCCCAGCGCCAGAAATTGATCGATGATCCTTCGCTCATTCCTGGGGCGGTGGAAGAATTCCTGC GGCTGACGTCTCCGGTGCAGGGCCTGGCACGTACCGCGACCCGCGACGTCATCATCGGCGACACCACCATTCCGGCCGGG CGTCGCGCACTGCTGCTCTACGGCAGTGCCAACCGCGATGAACGTGAATACGGCAATGACGCAGCCGAATTGGATGTCTT ACGGAAGCCGCGCAACATTCTCACCTTCAGCCATGGGAACCACCACTGCCTCGGAGCTGCCGCCGCACGCATGCAATCGC GGATTGCTCTTGAGGAACTACTCACCCGCATACCAGATTTCGAGGTCGATCTCGACGGAGTCACCTGGGCGGACGGCTCG TACGTGCGAAGGCCCCTGACAGTACCCATCCGCGTGCGATGA
Upstream 100 bases:
>100_bases ATCAAGCAGGCGCTCGACCCGGACGGAATCCTCAATCCCGGCACGCTGATCTAACCGGCGCGATATTGACACATCGACTG ACATGCCTTACACATAAGAC
Downstream 100 bases:
>100_bases TGGATTGATGAGGCAATTGCGCGACGAACACCAGCTCAGATGAGCTGGCTGGGCGACACCCGAACGTCGGTGGCCGCGGA AAAAATTCTGGACGCGGCTG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSVDVSHTVAPRYVPGTADNWTNPWPMYAALRDHDPVHHVVPEYTPDQDYYVLTRHADVYEAARDWETFSSARGLTVTYG DLEKTGMGDNPPMVMQDPPTHTEFRKLVSRGFTPRQVTAVEPKVREFVVQRLERLKERGEGDIVVELFKPLPSMVVAHYL GVPEEDRTQFDAWTDGIVAAASGGAIDIEAMQGEVAQTIGELMMYFTGLIERRRAEPEDDTVSHLVAAGVGADGDISGTL QILGFAFTMVTGGNDTTTGMLGGAIQLLHQNPAQRQKLIDDPSLIPGAVEEFLRLTSPVQGLARTATRDVIIGDTTIPAG RRALLLYGSANRDEREYGNDAAELDVLRKPRNILTFSHGNHHCLGAAAARMQSRIALEELLTRIPDFEVDLDGVTWADGS YVRRPLTVPIRVR
Sequences:
>Translated_413_residues MSVDVSHTVAPRYVPGTADNWTNPWPMYAALRDHDPVHHVVPEYTPDQDYYVLTRHADVYEAARDWETFSSARGLTVTYG DLEKTGMGDNPPMVMQDPPTHTEFRKLVSRGFTPRQVTAVEPKVREFVVQRLERLKERGEGDIVVELFKPLPSMVVAHYL GVPEEDRTQFDAWTDGIVAAASGGAIDIEAMQGEVAQTIGELMMYFTGLIERRRAEPEDDTVSHLVAAGVGADGDISGTL QILGFAFTMVTGGNDTTTGMLGGAIQLLHQNPAQRQKLIDDPSLIPGAVEEFLRLTSPVQGLARTATRDVIIGDTTIPAG RRALLLYGSANRDEREYGNDAAELDVLRKPRNILTFSHGNHHCLGAAAARMQSRIALEELLTRIPDFEVDLDGVTWADGS YVRRPLTVPIRVR >Mature_412_residues SVDVSHTVAPRYVPGTADNWTNPWPMYAALRDHDPVHHVVPEYTPDQDYYVLTRHADVYEAARDWETFSSARGLTVTYGD LEKTGMGDNPPMVMQDPPTHTEFRKLVSRGFTPRQVTAVEPKVREFVVQRLERLKERGEGDIVVELFKPLPSMVVAHYLG VPEEDRTQFDAWTDGIVAAASGGAIDIEAMQGEVAQTIGELMMYFTGLIERRRAEPEDDTVSHLVAAGVGADGDISGTLQ ILGFAFTMVTGGNDTTTGMLGGAIQLLHQNPAQRQKLIDDPSLIPGAVEEFLRLTSPVQGLARTATRDVIIGDTTIPAGR RALLLYGSANRDEREYGNDAAELDVLRKPRNILTFSHGNHHCLGAAAARMQSRIALEELLTRIPDFEVDLDGVTWADGSY VRRPLTVPIRVR
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45569; Mature: 45438
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDVSHTVAPRYVPGTADNWTNPWPMYAALRDHDPVHHVVPEYTPDQDYYVLTRHADVY CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCEEEEECCHHH EAARDWETFSSARGLTVTYGDLEKTGMGDNPPMVMQDPPTHTEFRKLVSRGFTPRQVTAV HHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEC EPKVREFVVQRLERLKERGEGDIVVELFKPLPSMVVAHYLGVPEEDRTQFDAWTDGIVAA CHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHCCCCCHHCCHHHHHCCCEEEE ASGGAIDIEAMQGEVAQTIGELMMYFTGLIERRRAEPEDDTVSHLVAAGVGADGDISGTL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHH QILGFAFTMVTGGNDTTTGMLGGAIQLLHQNPAQRQKLIDDPSLIPGAVEEFLRLTSPVQ HHHEEHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GLARTATRDVIIGDTTIPAGRRALLLYGSANRDEREYGNDAAELDVLRKPRNILTFSHGN HHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHCCCCEEEECCCC HHCLGAAAARMQSRIALEELLTRIPDFEVDLDGVTWADGSYVRRPLTVPIRVR CCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCHHCCCEEEEEEEC >Mature Secondary Structure SVDVSHTVAPRYVPGTADNWTNPWPMYAALRDHDPVHHVVPEYTPDQDYYVLTRHADVY CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCEEEEECCHHH EAARDWETFSSARGLTVTYGDLEKTGMGDNPPMVMQDPPTHTEFRKLVSRGFTPRQVTAV HHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEC EPKVREFVVQRLERLKERGEGDIVVELFKPLPSMVVAHYLGVPEEDRTQFDAWTDGIVAA CHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHCCCCCHHCCHHHHHCCCEEEE ASGGAIDIEAMQGEVAQTIGELMMYFTGLIERRRAEPEDDTVSHLVAAGVGADGDISGTL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHH QILGFAFTMVTGGNDTTTGMLGGAIQLLHQNPAQRQKLIDDPSLIPGAVEEFLRLTSPVQ HHHEEHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GLARTATRDVIIGDTTIPAGRRALLLYGSANRDEREYGNDAAELDVLRKPRNILTFSHGN HHHHHHHCCEEEECCCCCCCCEEEEEEECCCCCHHHHCCCHHHHHHHHCCCCEEEECCCC HHCLGAAAARMQSRIALEELLTRIPDFEVDLDGVTWADGSYVRRPLTVPIRVR CCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]