| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628490
Identifier: 169628490
GI number: 169628490
Start: 1399420
End: 1400679
Strand: Direct
Name: 169628490
Synonym: MAB_1399
Alternate gene names: NA
Gene position: 1399420-1400679 (Clockwise)
Preceding gene: 169628487
Following gene: 169628491
Centisome position: 27.62
GC content: 64.92
Gene sequence:
>1260_bases ATGGAATCGGTTCCGGCATTGTCATTGGCCGAGCGTGATCGCAGGTGGGGGCTGGCGCGCGAGTTGATGCGCCGGACGGG CGTGGACGCGTTGATCGTGTACGGCGACCGTGAGGCGGGCGCGCCCGCGGCATTCAACGTCGACGGCTACTTCACCAATG ACCGCCTGGGGTCCATCGTGCTGTTTGTGCGGGATGAAGCACCCACCGTGTTGACGTTCGCCTCGATGATGATTGCCGAT CACCTGCAGGCGCGGTACCGCGGTGACACGCAGTGGATCGAGCCTGACCAGATCTTTGTGGGCAAGACGGGATCTCATCT GGCCGCGGCCCTGAAACACCGTGGTGTCTCGTCAGGACCGGTGGGCGTACTGGGGCTGGAGCCGTACCCGCCGTTCTATT TCGACGGGGCAATCCCATTCCGGACCTTGCACGCGGTGACCGAAGAGCTGCCCGATATCAGCCTCGTCCCCGTCTATCGC CAGTTCTTCGAGCTGGCCTCGGTGCGCAGCGAGGAGGAACTCCGCTTGGTCCGTCACGCCGCGGGTATCGGCGAGCGGAT GTGTGACGCGATGAGGGCTGAAGCCCGGCCGGGCGCGACCGAGGCCGACCTGGTCGCCGCCGCGGTGTCGACATGTCTGC GCGATGGCGGGTACACCGCGGAGGTGCTGATCGGCTCCGGCCCGGAACACATCGGGTGGGGACCGGCGGCCTGGAACTAC CGTGCCCAGCCGCCTCGGGTACTAGCGGAGGGTGATGTTGTTCTTGCCGAGGTGTTTTCGCTGTTCGGACTGTTTGAGAC CCAGCATCAACCGATGATCGCCATCGGAGAGCCACACCCCGAGTTCCTCCGCGCTGCCGCGGTGGCCCGGGCGAGCTATG AGGCGGGTGTCGGCGCCCTGCGCGCGGGCAATACCTTTGGCGATGTGGTGGACGCGATGGAGGCGCCGCTGCTGGAGGCG CAGGGGTGGCACGTACACCCGCTGATTCACAGCATCAATCCATACGGACCCATCGGTTTCGGCACGGCTCCGGGAATCGA AGTGTTCGCGGATGCGGCGGGTTACGGTGATTGCGGCCGGCCGCCGACCGTGGGGCGGGAGGTTGAACTGAAGGAATCAA TGTCATTCGCATTCGAGCCCAACTGTGGATTTGGGAGGCGTCTGGCCAATCTCGGAGGAACCGTGTTGGTGGGTACCGAC CGAGGGCTGGAATTGAACGGTAATTCGACCAGGTTGATGTGGGCCGATGGCGTCGGCTGA
Upstream 100 bases:
>100_bases GGCATCCACATCGCGCTTCGGGGGATTCTACCGACGCCTTGAATTCATTCAAATGAATGAATTATGGTCTAGTGGTATGT CCTCTGCGAAAGGTGTTCTC
Downstream 100 bases:
>100_bases AGCCACCCGGGCGCGTCTCGTCACTGCGGGGCTCGCTCTATTCGCCGAGCATGGACTCGAGGGTGTCCGTACCCGCGCCC TGGCACAGGCGGCAGGGGTG
Product: peptidase
Products: NA
Alternate protein names: Peptidase M; Xaa-Pro Aminopeptidase-Like
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MESVPALSLAERDRRWGLARELMRRTGVDALIVYGDREAGAPAAFNVDGYFTNDRLGSIVLFVRDEAPTVLTFASMMIAD HLQARYRGDTQWIEPDQIFVGKTGSHLAAALKHRGVSSGPVGVLGLEPYPPFYFDGAIPFRTLHAVTEELPDISLVPVYR QFFELASVRSEEELRLVRHAAGIGERMCDAMRAEARPGATEADLVAAAVSTCLRDGGYTAEVLIGSGPEHIGWGPAAWNY RAQPPRVLAEGDVVLAEVFSLFGLFETQHQPMIAIGEPHPEFLRAAAVARASYEAGVGALRAGNTFGDVVDAMEAPLLEA QGWHVHPLIHSINPYGPIGFGTAPGIEVFADAAGYGDCGRPPTVGREVELKESMSFAFEPNCGFGRRLANLGGTVLVGTD RGLELNGNSTRLMWADGVG
Sequences:
>Translated_419_residues MESVPALSLAERDRRWGLARELMRRTGVDALIVYGDREAGAPAAFNVDGYFTNDRLGSIVLFVRDEAPTVLTFASMMIAD HLQARYRGDTQWIEPDQIFVGKTGSHLAAALKHRGVSSGPVGVLGLEPYPPFYFDGAIPFRTLHAVTEELPDISLVPVYR QFFELASVRSEEELRLVRHAAGIGERMCDAMRAEARPGATEADLVAAAVSTCLRDGGYTAEVLIGSGPEHIGWGPAAWNY RAQPPRVLAEGDVVLAEVFSLFGLFETQHQPMIAIGEPHPEFLRAAAVARASYEAGVGALRAGNTFGDVVDAMEAPLLEA QGWHVHPLIHSINPYGPIGFGTAPGIEVFADAAGYGDCGRPPTVGREVELKESMSFAFEPNCGFGRRLANLGGTVLVGTD RGLELNGNSTRLMWADGVG >Mature_419_residues MESVPALSLAERDRRWGLARELMRRTGVDALIVYGDREAGAPAAFNVDGYFTNDRLGSIVLFVRDEAPTVLTFASMMIAD HLQARYRGDTQWIEPDQIFVGKTGSHLAAALKHRGVSSGPVGVLGLEPYPPFYFDGAIPFRTLHAVTEELPDISLVPVYR QFFELASVRSEEELRLVRHAAGIGERMCDAMRAEARPGATEADLVAAAVSTCLRDGGYTAEVLIGSGPEHIGWGPAAWNY RAQPPRVLAEGDVVLAEVFSLFGLFETQHQPMIAIGEPHPEFLRAAAVARASYEAGVGALRAGNTFGDVVDAMEAPLLEA QGWHVHPLIHSINPYGPIGFGTAPGIEVFADAAGYGDCGRPPTVGREVELKESMSFAFEPNCGFGRRLANLGGTVLVGTD RGLELNGNSTRLMWADGVG
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45087; Mature: 45087
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVPALSLAERDRRWGLARELMRRTGVDALIVYGDREAGAPAAFNVDGYFTNDRLGSIV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCEEECCCCCEEE LFVRDEAPTVLTFASMMIADHLQARYRGDTQWIEPDQIFVGKTGSHLAAALKHRGVSSGP EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC VGVLGLEPYPPFYFDGAIPFRTLHAVTEELPDISLVPVYRQFFELASVRSEEELRLVRHA EEEEECCCCCCCEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHH AGIGERMCDAMRAEARPGATEADLVAAAVSTCLRDGGYTAEVLIGSGPEHIGWGPAAWNY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC RAQPPRVLAEGDVVLAEVFSLFGLFETQHQPMIAIGEPHPEFLRAAAVARASYEAGVGAL CCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEE RAGNTFGDVVDAMEAPLLEAQGWHVHPLIHSINPYGPIGFGTAPGIEVFADAAGYGDCGR ECCCHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCCC PPTVGREVELKESMSFAFEPNCGFGRRLANLGGTVLVGTDRGLELNGNSTRLMWADGVG CCCCCCEEEHHHCCCEEECCCCCHHHHHHHCCCEEEEECCCCEEECCCCEEEEEECCCC >Mature Secondary Structure MESVPALSLAERDRRWGLARELMRRTGVDALIVYGDREAGAPAAFNVDGYFTNDRLGSIV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCEEECCCCCEEE LFVRDEAPTVLTFASMMIADHLQARYRGDTQWIEPDQIFVGKTGSHLAAALKHRGVSSGP EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC VGVLGLEPYPPFYFDGAIPFRTLHAVTEELPDISLVPVYRQFFELASVRSEEELRLVRHA EEEEECCCCCCCEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHH AGIGERMCDAMRAEARPGATEADLVAAAVSTCLRDGGYTAEVLIGSGPEHIGWGPAAWNY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC RAQPPRVLAEGDVVLAEVFSLFGLFETQHQPMIAIGEPHPEFLRAAAVARASYEAGVGAL CCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEE RAGNTFGDVVDAMEAPLLEAQGWHVHPLIHSINPYGPIGFGTAPGIEVFADAAGYGDCGR ECCCHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCCC PPTVGREVELKESMSFAFEPNCGFGRRLANLGGTVLVGTDRGLELNGNSTRLMWADGVG CCCCCCEEEHHHCCCEEECCCCCHHHHHHHCCCEEEEECCCCEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA