Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 169628465

GI number: 169628465

Start: 1371626

End: 1372459

Strand: Direct

Name: ycjP [C]

Synonym: MAB_1374

Alternate gene names: 169628465

Gene position: 1371626-1372459 (Clockwise)

Preceding gene: 169628464

Following gene: 169628466

Centisome position: 27.07

GC content: 61.99

Gene sequence:

>834_bases
GTGAGCCGCCCCGATTCCTCGCGTACCGCCGGCTGGCTGATCGCCGATGTGCTGGTGCTGTGCTATGCACTGGTGCCGGT
GCTGTGGGTGCTCAGCCTGTCGCTCAAACCGACGTCGTCGGTCAAGGACGGCAAGTTCTTTCCGTGGCCGATCACCCTGG
ACAACTACCGGGGCATCTTCAGCGGCAACGTGTTCACCTCGGCGCTGGTCAATTCCATCGGCATCGGGCTCATCGCGACA
GTGATCGCCGTCAGTGTGGGCACCATGGCGGCCTACGCGGTTGCGCGGCTGGATTTCCCAGGAAAGAAGGCGCTCATCGG
AGCGGCCCTGTTGATTGCGATGTTTCCGCAGATCTCGCTGGTGACACCAATTTTCAACATCGAGCGCTCCGTCGGTCTGT
TCGACACCTGGCCGGGATTGATCATCCCGTACATCACCTTTGCGCTGCCGCTGGCCATCTACACCCTGTCGGCCTTCTTC
CGGGAGATCCCCTGGGAACTGGAGAAGGCTGCCAAGATGGACGGCGCCACTCCGGCGCAGGCCTTCTGGAAGGTCATTGC
CCCGTTGGCCACGCCCGGCATCGTCACCTCCGCGATCTTGGTATTCATCTTCGCGTGGAACGACCTGCTGCTGGCGATCT
CGCTGACCGCCACCGACCGATCCATCACCGCCCCGGTGGCCATCGCGAACTTCACCGGCAGTTCGCAATTCGAGGAGCCC
ACCGGATCGATCGCGGCAGGCGCCATTGTCATCACGGTGCCGATCATCATCTTCGTGCTCATATTTCAACGACGGATCGT
CGCCGGATTGACCTCCGGTGCAGTGAAGGGTTAG

Upstream 100 bases:

>100_bases
TCAGCGTGCTGATCTTCCTGTGTGTGGCCATCATCGCCGTCATCTTCATCAAGGGCTTCGGGGCTTCGGCGCCGACCACG
GATGGCGAGGAGGCAAGACG

Downstream 100 bases:

>100_bases
CGATGGCTGAGATAGTGCTCAACCAGGTGTCCAAGACATACACGGACGGTTCGGCCGCGGTGCGGGACGTGAGCCTGAAC
ATCGCCGATGGCGAGTTCAT

Product: sugar ABC transporter, permease protein SugB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSSVKDGKFFPWPITLDNYRGIFSGNVFTSALVNSIGIGLIAT
VIAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERSVGLFDTWPGLIIPYITFALPLAIYTLSAFF
REIPWELEKAAKMDGATPAQAFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSSQFEEP
TGSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG

Sequences:

>Translated_277_residues
MSRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSSVKDGKFFPWPITLDNYRGIFSGNVFTSALVNSIGIGLIAT
VIAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERSVGLFDTWPGLIIPYITFALPLAIYTLSAFF
REIPWELEKAAKMDGATPAQAFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSSQFEEP
TGSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG
>Mature_276_residues
SRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSSVKDGKFFPWPITLDNYRGIFSGNVFTSALVNSIGIGLIATV
IAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERSVGLFDTWPGLIIPYITFALPLAIYTLSAFFR
EIPWELEKAAKMDGATPAQAFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSSQFEEPT
GSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=251, Percent_Identity=33.4661354581673, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790464, Length=273, Percent_Identity=30.4029304029304, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789860, Length=228, Percent_Identity=25, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29519; Mature: 29388

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSSVKDGKFFPWPITLDNYRGIF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEE
SGNVFTSALVNSIGIGLIATVIAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH
VTPIFNIERSVGLFDTWPGLIIPYITFALPLAIYTLSAFFREIPWELEKAAKMDGATPAQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
AFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSSQFEEP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCC
TGSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSSVKDGKFFPWPITLDNYRGIF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEE
SGNVFTSALVNSIGIGLIATVIAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH
VTPIFNIERSVGLFDTWPGLIIPYITFALPLAIYTLSAFFREIPWELEKAAKMDGATPAQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
AFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSSQFEEP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCC
TGSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]