| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628451
Identifier: 169628451
GI number: 169628451
Start: 1358147
End: 1358791
Strand: Reverse
Name: 169628451
Synonym: MAB_1360c
Alternate gene names: NA
Gene position: 1358791-1358147 (Counterclockwise)
Preceding gene: 169628452
Following gene: 169628450
Centisome position: 26.82
GC content: 62.02
Gene sequence:
>645_bases ATGCGTTCAGCCGACGACCTCACTGCCGCCGCCCGCATTCGTGACGCTGCGATCAAGTTGTGGGGCGAGCAGGGAAACGG CGCGAGCGTGCGGGCCATCGCCGACGCGGCGGGGGTCAGCCCGGCACTGGTCATCCATCACTACGGGTCCAAGGACGGGC TCCGGCAAGCGGTGGACGACTACCTGCTGGCGTACATCCGCTCGGAGAAATCGCGCACCATCACGTCGAATGACCCCCAA GTCTGGCTGGACGCCATCGACGAAATCGAAACGTTCGCACCGATGGTCAGATATCTGCTGCACAGCGTGCAATCCGGCGG CGAACCGGGCCGCGCCTTCCTGCGCCGTTCGATCGACGATGCTGAGCAGTACCTTGAGGACGGGGTACGTGCCGGCACCA TCAAGCCGAGCCGCGATCCCAAGGGTCGCGCCTTGTGGGTCTCACTGAACAGCGTGGGCTCGCTGATCATCTACGTGCAG ATGCACGCGAATGAGGACCTGCGAGAAATCTTGCGGCGCTACGCCGATGAACTGATCTTCCCCGCGATCGAGGTCTACAC CGAGGGCCTGATGACAGATTCCACCATGCTCGATGCCTTTGCCGTACAACAGGATAAATCTCACAGCAAAGGAGATCCGA AGTGA
Upstream 100 bases:
>100_bases CTCCGCCGCTCACATCCGGCATTTTTTGTGGCACCGGCTCTCGCTCGAAGCGCGGGGACCTCCTTGACTTCGCATTGAAC GCATGTTTAATCTGCTAAAC
Downstream 100 bases:
>100_bases CGTATCCGAATTTGGCGGTCGAAATACGAGGACTGACGAAGCTTTTCGGAAAAACCAAGGCACTCGACGGCCTGGATTTG TCCGTCGCACATGGCGAAGT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDDYLLAYIRSEKSRTITSNDPQ VWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDDAEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQ MHANEDLREILRRYADELIFPAIEVYTEGLMTDSTMLDAFAVQQDKSHSKGDPK
Sequences:
>Translated_214_residues MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDDYLLAYIRSEKSRTITSNDPQ VWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDDAEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQ MHANEDLREILRRYADELIFPAIEVYTEGLMTDSTMLDAFAVQQDKSHSKGDPK >Mature_214_residues MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDDYLLAYIRSEKSRTITSNDPQ VWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDDAEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQ MHANEDLREILRRYADELIFPAIEVYTEGLMTDSTMLDAFAVQQDKSHSKGDPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23661; Mature: 23661
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDD CCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHH YLLAYIRSEKSRTITSNDPQVWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDD HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQMHANEDLREILRRYADELIF HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH PAIEVYTEGLMTDSTMLDAFAVQQDKSHSKGDPK HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDD CCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHH YLLAYIRSEKSRTITSNDPQVWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDD HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQMHANEDLREILRRYADELIF HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH PAIEVYTEGLMTDSTMLDAFAVQQDKSHSKGDPK HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA