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The map label for this gene is fadM [H]

Identifier: 169628424

GI number: 169628424

Start: 1332995

End: 1333966

Strand: Direct

Name: fadM [H]

Synonym: MAB_1331

Alternate gene names: 169628424

Gene position: 1332995-1333966 (Clockwise)

Preceding gene: 169628423

Following gene: 169628425

Centisome position: 26.31

GC content: 64.2

Gene sequence:

>972_bases
GTGAGGATGGCTGAATGGTTCGGGAAAACTGCCAGACCTGCCATCCTGGCGGCCAGCAGATCGGCCCGGCTGCGGCACGC
CGCCGAACGCATGCCGCTGACCCGACAGGTAGTACGCCGCTTCGTCCCCGGTGAATCTCAGGACGACGTACTCGGTGCCA
GCACCGGGCTGCTTGATTCGGGCCGGTTCATCTCCATTGACTATCTCGGTGAGGACACCACCGACAGCGAGCAGGCCACC
CGCACGGTGTCGGCGTACCTCTCGCTGCTGGATGCGTTGGCACAGCGCAGCGATGCCGTGCACACCGGCGTGCGCCCGCT
GGAGATCTCGCTCAAGCTGTCCGCGCTGGGACAGGCGTTGCCGCGCGACGGGGAGCGCATCGCTCTGGAGAATGCACAGC
TGTTGTGCGCCAAGGCGGATCAAGCTGGAGTGTGGGTGACGGCCGATGCCGAGGATCACACCACCACGGACTCGACGCTG
AACATTGTGCGTGAATTGCGGGCCGACTTCCCCGGGCTGGGCACCGTGCTGCAGGCATATCTGAAACGTACCTACGCTGA
CTGCGTTGACTTGTCGGGTAAGGGCTCACGTATTCGGCTGTGCAAAGGCGCCTATGACGAGCCGGCGGCTGTTGCGCATC
GAGACCCCGAGGACGTCGATGTCGCCTATCTGCGCTGTCTGCGCGTACTGATGGAGGGTGACGGGTATCCCATGGTGGCC
TCGCACGATCCCGCCATCATCGAGGCGGCGGGCCTGATGGCACGTGAGACGGGCAGAGGTCCCGGCGATTACGAGTATCA
GATGCTGTACGGAATCCGAGAGGCCGAGCAGCGTCGGCTGGCCGGTGTGGGGCACCACATGCGGGTCTATGTGCCGTTCG
GTGAACAGTGGTACGGATACTTCGTGCGTCGTATCGCCGAGCGCCCCGCCAACATGACGTTCTTCCTTCGCGCACTCGTT
TCCGGAGGCTAG

Upstream 100 bases:

>100_bases
AAGGCCGGATCTCCGCTGAATCTGCAGCGTTGGCTATTGCCCCGGTCGATCAAGGAAACATTCAACGCCCCAACGGAATA
TCAATACCCGCATATGGAGC

Downstream 100 bases:

>100_bases
CTCTAGGCTGGCTTCATGCTGCTTACGTCGCTTCACCCCAAGTCGCCTGATCTAGCGGACGCGGTCCGTATCGGTGAGGA
CAGCTGGGGGCGCGGTGACC

Product: proline dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRMAEWFGKTARPAILAASRSARLRHAAERMPLTRQVVRRFVPGESQDDVLGASTGLLDSGRFISIDYLGEDTTDSEQAT
RTVSAYLSLLDALAQRSDAVHTGVRPLEISLKLSALGQALPRDGERIALENAQLLCAKADQAGVWVTADAEDHTTTDSTL
NIVRELRADFPGLGTVLQAYLKRTYADCVDLSGKGSRIRLCKGAYDEPAAVAHRDPEDVDVAYLRCLRVLMEGDGYPMVA
SHDPAIIEAAGLMARETGRGPGDYEYQMLYGIREAEQRRLAGVGHHMRVYVPFGEQWYGYFVRRIAERPANMTFFLRALV
SGG

Sequences:

>Translated_323_residues
MRMAEWFGKTARPAILAASRSARLRHAAERMPLTRQVVRRFVPGESQDDVLGASTGLLDSGRFISIDYLGEDTTDSEQAT
RTVSAYLSLLDALAQRSDAVHTGVRPLEISLKLSALGQALPRDGERIALENAQLLCAKADQAGVWVTADAEDHTTTDSTL
NIVRELRADFPGLGTVLQAYLKRTYADCVDLSGKGSRIRLCKGAYDEPAAVAHRDPEDVDVAYLRCLRVLMEGDGYPMVA
SHDPAIIEAAGLMARETGRGPGDYEYQMLYGIREAEQRRLAGVGHHMRVYVPFGEQWYGYFVRRIAERPANMTFFLRALV
SGG
>Mature_323_residues
MRMAEWFGKTARPAILAASRSARLRHAAERMPLTRQVVRRFVPGESQDDVLGASTGLLDSGRFISIDYLGEDTTDSEQAT
RTVSAYLSLLDALAQRSDAVHTGVRPLEISLKLSALGQALPRDGERIALENAQLLCAKADQAGVWVTADAEDHTTTDSTL
NIVRELRADFPGLGTVLQAYLKRTYADCVDLSGKGSRIRLCKGAYDEPAAVAHRDPEDVDVAYLRCLRVLMEGDGYPMVA
SHDPAIIEAAGLMARETGRGPGDYEYQMLYGIREAEQRRLAGVGHHMRVYVPFGEQWYGYFVRRIAERPANMTFFLRALV
SGG

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=314, Percent_Identity=29.2993630573248, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 35580; Mature: 35580

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMAEWFGKTARPAILAASRSARLRHAAERMPLTRQVVRRFVPGESQDDVLGASTGLLDS
CCCHHHCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GRFISIDYLGEDTTDSEQATRTVSAYLSLLDALAQRSDAVHTGVRPLEISLKLSALGQAL
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEHHHHHHHC
PRDGERIALENAQLLCAKADQAGVWVTADAEDHTTTDSTLNIVRELRADFPGLGTVLQAY
CCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
LKRTYADCVDLSGKGSRIRLCKGAYDEPAAVAHRDPEDVDVAYLRCLRVLMEGDGYPMVA
HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
SHDPAIIEAAGLMARETGRGPGDYEYQMLYGIREAEQRRLAGVGHHMRVYVPFGEQWYGY
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHH
FVRRIAERPANMTFFLRALVSGG
HHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRMAEWFGKTARPAILAASRSARLRHAAERMPLTRQVVRRFVPGESQDDVLGASTGLLDS
CCCHHHCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GRFISIDYLGEDTTDSEQATRTVSAYLSLLDALAQRSDAVHTGVRPLEISLKLSALGQAL
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEHHHHHHHC
PRDGERIALENAQLLCAKADQAGVWVTADAEDHTTTDSTLNIVRELRADFPGLGTVLQAY
CCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
LKRTYADCVDLSGKGSRIRLCKGAYDEPAAVAHRDPEDVDVAYLRCLRVLMEGDGYPMVA
HHHHHHHHHCCCCCCCEEEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
SHDPAIIEAAGLMARETGRGPGDYEYQMLYGIREAEQRRLAGVGHHMRVYVPFGEQWYGY
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHH
FVRRIAERPANMTFFLRALVSGG
HHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA