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The map label for this gene is 169628395

Identifier: 169628395

GI number: 169628395

Start: 1304209

End: 1304793

Strand: Direct

Name: 169628395

Synonym: MAB_1302

Alternate gene names: NA

Gene position: 1304209-1304793 (Clockwise)

Preceding gene: 169628389

Following gene: 169628397

Centisome position: 25.74

GC content: 61.37

Gene sequence:

>585_bases
TTGGCGAGATTGCAGCTTGCGCAAGACCCGGCCGCCGATGAGTTGCTGGAGGACAACCCGCTGGCGCTATTGATAGCGAT
GCTCCTGGATCAACAGATTCCGATGGAGGTTGCTTTCGCAGGGCCCAAGAAGATAGCCGACCGGATCGGCGGTATCGACG
CGCACCAGATCGCGGAGTACGACCCCGACAAATTCGTGGCCCTATGTTCGGAGCGACCCGCCATACACCGGTTCCCCGGA
TCGATGGCCAAGCGCGTTCAGGTGTTGGCGCAGGAAATCGTCGACGAGTACGACGGCCGCGCCGAGAACATCTGGAAGGC
CGGAGATCCGGACGGGCCCGAGTTGCTCAAGAGACTCAAGGCGCTCCCCGGTTTCGGCGAGCAAAAGGCGAAGATCTTCC
TGGCCTTGCTGGGCAAGCAGTACGGTGTCCAGCCCAAGGACTGGCGCAAGGCAGCGGGGAACTATGGCGAGAAGGGCACA
CATCTTTCGGTGGCAGATGTCGTCGACGCCGAGTCGCTGGGCCTGGTGCGCGCCCATAAGAAGGAAATGAAGGCTGCTGC
CAAAGCAAAGGCGGCCAAGGCATAA

Upstream 100 bases:

>100_bases
GACAGCGGCAGCCTCCCCGAGCGTGGCGATCTTGGTCGCCCAAGTTGCCGTAGCGTAACACCGCTGAGGTTGTCAAAGTT
CAGAAGGAAGGAATGTCACA

Downstream 100 bases:

>100_bases
CGCCCTGACCGCCTTGCTTCGTAGGAACGAGCTACGGCAGCGCCGCGAACATCGGTGCCGACGGAACCAGGCCGGCCCCG
GGGGTGGCGGCGGCCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: HhH-GPD Protein; HhH-GPD; HhH-GPD Family Base Excision DNA Repair Protein; Hhh-Gpd Family DNA Repair Protein; HhH-GPD Superfamily Base Excision DNA Repair Protein; Base Excision DNA Repair Protein HhH-GPD Family Protein

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MARLQLAQDPAADELLEDNPLALLIAMLLDQQIPMEVAFAGPKKIADRIGGIDAHQIAEYDPDKFVALCSERPAIHRFPG
SMAKRVQVLAQEIVDEYDGRAENIWKAGDPDGPELLKRLKALPGFGEQKAKIFLALLGKQYGVQPKDWRKAAGNYGEKGT
HLSVADVVDAESLGLVRAHKKEMKAAAKAKAAKA

Sequences:

>Translated_194_residues
MARLQLAQDPAADELLEDNPLALLIAMLLDQQIPMEVAFAGPKKIADRIGGIDAHQIAEYDPDKFVALCSERPAIHRFPG
SMAKRVQVLAQEIVDEYDGRAENIWKAGDPDGPELLKRLKALPGFGEQKAKIFLALLGKQYGVQPKDWRKAAGNYGEKGT
HLSVADVVDAESLGLVRAHKKEMKAAAKAKAAKA
>Mature_193_residues
ARLQLAQDPAADELLEDNPLALLIAMLLDQQIPMEVAFAGPKKIADRIGGIDAHQIAEYDPDKFVALCSERPAIHRFPGS
MAKRVQVLAQEIVDEYDGRAENIWKAGDPDGPELLKRLKALPGFGEQKAKIFLALLGKQYGVQPKDWRKAAGNYGEKGTH
LSVADVVDAESLGLVRAHKKEMKAAAKAKAAKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21104; Mature: 20972

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLQLAQDPAADELLEDNPLALLIAMLLDQQIPMEVAFAGPKKIADRIGGIDAHQIAEY
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHEECCCHHHHHHHHCCCCHHHHHHC
DPDKFVALCSERPAIHRFPGSMAKRVQVLAQEIVDEYDGRAENIWKAGDPDGPELLKRLK
CCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHH
ALPGFGEQKAKIFLALLGKQYGVQPKDWRKAAGNYGEKGTHLSVADVVDAESLGLVRAHK
HCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHH
KEMKAAAKAKAAKA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ARLQLAQDPAADELLEDNPLALLIAMLLDQQIPMEVAFAGPKKIADRIGGIDAHQIAEY
CCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHEECCCHHHHHHHHCCCCHHHHHHC
DPDKFVALCSERPAIHRFPGSMAKRVQVLAQEIVDEYDGRAENIWKAGDPDGPELLKRLK
CCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHH
ALPGFGEQKAKIFLALLGKQYGVQPKDWRKAAGNYGEKGTHLSVADVVDAESLGLVRAHK
HCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHH
KEMKAAAKAKAAKA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA