| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628365
Identifier: 169628365
GI number: 169628365
Start: 1276244
End: 1276663
Strand: Direct
Name: 169628365
Synonym: MAB_1272
Alternate gene names: NA
Gene position: 1276244-1276663 (Clockwise)
Preceding gene: 169628363
Following gene: 169628366
Centisome position: 25.19
GC content: 65.71
Gene sequence:
>420_bases ATGTCGACCCGAACGCGCCGCAGGAGTGGCCGTAGTCGACTGTGGCTTGTCGCGGTCCTGATCGGGATGATGGCGAGCCT GCCGATCCTGCACTGTGTTTCCGGGCATGGCGGTCCCGATGGACCGCATCATCAGGCGACGCATGCGGCACTGCCTGGGC ATGGTCCGTCTGCCTCGCATGCGCACCTGGACAACTCGATACACCAGCTGTCATGTCAGACCCTGGACGGAATGGTCGGG CTGACTCGCGGCCTGAACCCGTTACGCGTTCTGATCGTGCTCGCCGCACTGGTGCTGGCCACTGTGGTGTTCCAGCCCGT AGCGGCGCACCTGTCGCGGGGGCCACCGTTGCCCGCCGGCTGTTATGAGGCCCGCACGGGCCGCGACATCCTCACCCATC TCTGCGTTATTCGGCGCTGA
Upstream 100 bases:
>100_bases ACCTTGGAAGCATCAATCACATTGAGCGCTCACCACGGATAGGTAGCGATCGGATCACATACCCCGTGAGGGTATGAAAA ACAGTGCTAACCTGGCTCCC
Downstream 100 bases:
>100_bases TCGGCCCTCGGGCACGACGGGCTTTTCCCGTCATGCCCACACGCGCCGCCATCAGCTTCCCGGCCGCTTCGCAGCGGCCC TCACGCAGGGATTCTCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSTRTRRRSGRSRLWLVAVLIGMMASLPILHCVSGHGGPDGPHHQATHAALPGHGPSASHAHLDNSIHQLSCQTLDGMVG LTRGLNPLRVLIVLAALVLATVVFQPVAAHLSRGPPLPAGCYEARTGRDILTHLCVIRR
Sequences:
>Translated_139_residues MSTRTRRRSGRSRLWLVAVLIGMMASLPILHCVSGHGGPDGPHHQATHAALPGHGPSASHAHLDNSIHQLSCQTLDGMVG LTRGLNPLRVLIVLAALVLATVVFQPVAAHLSRGPPLPAGCYEARTGRDILTHLCVIRR >Mature_138_residues STRTRRRSGRSRLWLVAVLIGMMASLPILHCVSGHGGPDGPHHQATHAALPGHGPSASHAHLDNSIHQLSCQTLDGMVGL TRGLNPLRVLIVLAALVLATVVFQPVAAHLSRGPPLPAGCYEARTGRDILTHLCVIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14799; Mature: 14667
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRTRRRSGRSRLWLVAVLIGMMASLPILHCVSGHGGPDGPHHQATHAALPGHGPSASH CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH AHLDNSIHQLSCQTLDGMVGLTRGLNPLRVLIVLAALVLATVVFQPVAAHLSRGPPLPAG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC CYEARTGRDILTHLCVIRR CHHHCCCHHHHHHHHHHCC >Mature Secondary Structure STRTRRRSGRSRLWLVAVLIGMMASLPILHCVSGHGGPDGPHHQATHAALPGHGPSASH CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH AHLDNSIHQLSCQTLDGMVGLTRGLNPLRVLIVLAALVLATVVFQPVAAHLSRGPPLPAG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC CYEARTGRDILTHLCVIRR CHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA