| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628363
Identifier: 169628363
GI number: 169628363
Start: 1272924
End: 1274441
Strand: Direct
Name: 169628363
Synonym: MAB_1270
Alternate gene names: NA
Gene position: 1272924-1274441 (Clockwise)
Preceding gene: 169628362
Following gene: 169628365
Centisome position: 25.12
GC content: 61.07
Gene sequence:
>1518_bases ATGACGCTTCGTCGATCGGCGCGGTGGATTCTGCGGGAGTTCATCGAGACGCTCAAGATCGGCTGGGCCGGCCTGGCCCT GGTCTTGGTCAACGAGTCGTTTCTGCTCCTTTTCCTGGCGTATCTTGTATTGGTCGTTTTGCTGAAGACATGGGCATGGC GAAGAACCACGATCCAGGTTGGCGGCGATGCAGTTGTGCTGGAAGTTCGGGGTGTGACCACCAGGCGAGAGTCCGTCGCG CGCAGTGCCGTTGAAACGCTGGTGGTATCCGCCGAAATGCTGGATCGACTGTGCGGGCTGCAGACCTTACAACTGACCAC CAACGACGATTCCAATAATCTGGTTCTGGACGGACTGTCGCCTCAGTCTGTGCGTGACATTGGCGCAAGCCTGGAAACCG AAGTCAGCGAAAAGGCTTCCGATGTTCGGGTGATTGCTGCCTTCAGGCCCGGGTGGTTTGGCTATTCCCTGCTCACTCCC ATCGGCTGGGCGGGCGTTGTCGGCGTGGCGTTTCTGGCGAACAGAATTGGTGACCGCTTCGTGAGCCAGTTTGATGGCCT CAGTGCGCAAGCGCGGGCCGCACTTGCCCACATCGCCACGCCGTTGCTCATTGTTCTCGGTGTGGCATCGGGGGTCGCGA TCGTATTGTTTTCGTACGCGGCCCGATACGGTGGGTTTCGGCTGGAGGAATCGCCGGGTACGGGTAGTGGCGAGGATCCA TTGCTGATCTACCGACGGGGGCTGCTCGAGACGAAAGCAATCACGTTCGCCCGGAGCCGGATTCGTGGAATTAGATTGAC CGAGCCTATTCCACTGCGGTGGGCCAAGGGTGCGCGGCTACATGCGGAAATTGTTGGGCACAAAGATATTGAACTGCTGC CACCGACAGCGCGCACGTTCGCGCTCCACATTGCCCGCGATGTGCTTTCCCATCACGGGCTTGATGCCGTTGCTGCCGTC AGTGCGGGTGGTCGGCTTGCCGCCCACGGTCGTGCCGCGCGACGGGTCTCTTTGCAAGAGTCGGCGACTGTTCCGCTCGT GCTTATTGTCGCCGCAGCCGGCGCCGCGGTGATCAATGCCGAGAGTTCCTTTCTGGTGATCCTGGCATTGGTTTTGCTCA TTGTCCGGCTGTGCTACACCTGGATTGTTTCTGGACGGCGCGCATCTGCATGGGGGCGGCGCTCGAACCAGCCACTGGTC CTCGCCCAGTCACACCCGCGGTTGGCGCGCAATCTCAGTATCACCACTTGTGATTCAGCCCTGGGTGTTCGCACCCGTCA GAGCTGGCGGCAGCGTAGGGCCGGTGTGGCCGACCTCAGGATTCGATCGAATGCAGGCGACGGAGCGTTGGCGGTGGACT GTCTACCTGTCATCGCGGCAACGAATTTGGCGGTCTGCCTGTGCCCCGTCGCCGCTACCTTTGCACGGCCGGTGTCGCCA CCGGCCGATCCGGAACATGCCGTTGCCCGATTCGAAAGGTTCGGCACCCTGCACCATGGCATGGGGATGACCACATAG
Upstream 100 bases:
>100_bases GTTCGGGCGCTGGCACGATCAACATTGACAACATTGATCACTTGGTCGCGGCAGAGATTGCTAACAAGTCTGCAATCGCC ACTGCCCCGGATACCGACGA
Downstream 100 bases:
>100_bases CCATTCCTGAACTCATCGTGGGTGAGCTAGTCTCCAAGCCATTCTGGATTGTCGGTATGTTCAGCAGAATGCGGCAGGTC AGTTGACACGTTGTCGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTLRRSARWILREFIETLKIGWAGLALVLVNESFLLLFLAYLVLVVLLKTWAWRRTTIQVGGDAVVLEVRGVTTRRESVA RSAVETLVVSAEMLDRLCGLQTLQLTTNDDSNNLVLDGLSPQSVRDIGASLETEVSEKASDVRVIAAFRPGWFGYSLLTP IGWAGVVGVAFLANRIGDRFVSQFDGLSAQARAALAHIATPLLIVLGVASGVAIVLFSYAARYGGFRLEESPGTGSGEDP LLIYRRGLLETKAITFARSRIRGIRLTEPIPLRWAKGARLHAEIVGHKDIELLPPTARTFALHIARDVLSHHGLDAVAAV SAGGRLAAHGRAARRVSLQESATVPLVLIVAAAGAAVINAESSFLVILALVLLIVRLCYTWIVSGRRASAWGRRSNQPLV LAQSHPRLARNLSITTCDSALGVRTRQSWRQRRAGVADLRIRSNAGDGALAVDCLPVIAATNLAVCLCPVAATFARPVSP PADPEHAVARFERFGTLHHGMGMTT
Sequences:
>Translated_505_residues MTLRRSARWILREFIETLKIGWAGLALVLVNESFLLLFLAYLVLVVLLKTWAWRRTTIQVGGDAVVLEVRGVTTRRESVA RSAVETLVVSAEMLDRLCGLQTLQLTTNDDSNNLVLDGLSPQSVRDIGASLETEVSEKASDVRVIAAFRPGWFGYSLLTP IGWAGVVGVAFLANRIGDRFVSQFDGLSAQARAALAHIATPLLIVLGVASGVAIVLFSYAARYGGFRLEESPGTGSGEDP LLIYRRGLLETKAITFARSRIRGIRLTEPIPLRWAKGARLHAEIVGHKDIELLPPTARTFALHIARDVLSHHGLDAVAAV SAGGRLAAHGRAARRVSLQESATVPLVLIVAAAGAAVINAESSFLVILALVLLIVRLCYTWIVSGRRASAWGRRSNQPLV LAQSHPRLARNLSITTCDSALGVRTRQSWRQRRAGVADLRIRSNAGDGALAVDCLPVIAATNLAVCLCPVAATFARPVSP PADPEHAVARFERFGTLHHGMGMTT >Mature_504_residues TLRRSARWILREFIETLKIGWAGLALVLVNESFLLLFLAYLVLVVLLKTWAWRRTTIQVGGDAVVLEVRGVTTRRESVAR SAVETLVVSAEMLDRLCGLQTLQLTTNDDSNNLVLDGLSPQSVRDIGASLETEVSEKASDVRVIAAFRPGWFGYSLLTPI GWAGVVGVAFLANRIGDRFVSQFDGLSAQARAALAHIATPLLIVLGVASGVAIVLFSYAARYGGFRLEESPGTGSGEDPL LIYRRGLLETKAITFARSRIRGIRLTEPIPLRWAKGARLHAEIVGHKDIELLPPTARTFALHIARDVLSHHGLDAVAAVS AGGRLAAHGRAARRVSLQESATVPLVLIVAAAGAAVINAESSFLVILALVLLIVRLCYTWIVSGRRASAWGRRSNQPLVL AQSHPRLARNLSITTCDSALGVRTRQSWRQRRAGVADLRIRSNAGDGALAVDCLPVIAATNLAVCLCPVAATFARPVSPP ADPEHAVARFERFGTLHHGMGMTT
Specific function: Unknown
COG id: COG3428
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54412; Mature: 54281
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRRSARWILREFIETLKIGWAGLALVLVNESFLLLFLAYLVLVVLLKTWAWRRTTIQV CCCCHHHHHHHHHHHHHHHHCHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEE GGDAVVLEVRGVTTRRESVARSAVETLVVSAEMLDRLCGLQTLQLTTNDDSNNLVLDGLS CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCC PQSVRDIGASLETEVSEKASDVRVIAAFRPGWFGYSLLTPIGWAGVVGVAFLANRIGDRF CHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH VSQFDGLSAQARAALAHIATPLLIVLGVASGVAIVLFSYAARYGGFRLEESPGTGSGEDP HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCC LLIYRRGLLETKAITFARSRIRGIRLTEPIPLRWAKGARLHAEIVGHKDIELLPPTARTF EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCCCEECCCCHHHH ALHIARDVLSHHGLDAVAAVSAGGRLAAHGRAARRVSLQESATVPLVLIVAAAGAAVINA HHHHHHHHHHHCCCCHHHHHCCCCCEEECCHHHHEEEHHCCCCCCCEEEEHHCCCEEEEC ESSFLVILALVLLIVRLCYTWIVSGRRASAWGRRSNQPLVLAQSHPRLARNLSITTCDSA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHCCEEEECCHH LGVRTRQSWRQRRAGVADLRIRSNAGDGALAVDCLPVIAATNLAVCLCPVAATFARPVSP HCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PADPEHAVARFERFGTLHHGMGMTT CCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TLRRSARWILREFIETLKIGWAGLALVLVNESFLLLFLAYLVLVVLLKTWAWRRTTIQV CCCHHHHHHHHHHHHHHHHCHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEE GGDAVVLEVRGVTTRRESVARSAVETLVVSAEMLDRLCGLQTLQLTTNDDSNNLVLDGLS CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCC PQSVRDIGASLETEVSEKASDVRVIAAFRPGWFGYSLLTPIGWAGVVGVAFLANRIGDRF CHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH VSQFDGLSAQARAALAHIATPLLIVLGVASGVAIVLFSYAARYGGFRLEESPGTGSGEDP HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCC LLIYRRGLLETKAITFARSRIRGIRLTEPIPLRWAKGARLHAEIVGHKDIELLPPTARTF EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCCCEECCCCHHHH ALHIARDVLSHHGLDAVAAVSAGGRLAAHGRAARRVSLQESATVPLVLIVAAAGAAVINA HHHHHHHHHHHCCCCHHHHHCCCCCEEECCHHHHEEEHHCCCCCCCEEEEHHCCCEEEEC ESSFLVILALVLLIVRLCYTWIVSGRRASAWGRRSNQPLVLAQSHPRLARNLSITTCDSA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHCCEEEECCHH LGVRTRQSWRQRRAGVADLRIRSNAGDGALAVDCLPVIAATNLAVCLCPVAATFARPVSP HCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PADPEHAVARFERFGTLHHGMGMTT CCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA