| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is cyp125 [H]
Identifier: 169628304
GI number: 169628304
Start: 1223999
End: 1225255
Strand: Reverse
Name: cyp125 [H]
Synonym: MAB_1211c
Alternate gene names: 169628304
Gene position: 1225255-1223999 (Counterclockwise)
Preceding gene: 169628305
Following gene: 169628303
Centisome position: 24.18
GC content: 62.37
Gene sequence:
>1257_bases GTGACCGCCATGAAGACCGCTGCGGAGCTGGGCCTGCCGGAGGGCTTTGACTTCACCGATCCCGAGTTGTACGGGAACCG GATGCCGCATGAGGAGTTCGCCACGCTACGCCGCGAGGCGCCCGTCTGGTGGAACCCGCAGCCGCGCACGGTCGGCGGAT TCGCCGACGAGGGATACTGGGTGATTTCCAAACACCGTGATGTACGGGAGGTTTCGCTGCACACCGATACCTTCTCGTCG GGCCGCAAGGGCGCCATCCCCCGTCTAGAGGATCACATCAGCCCAGAGGAGTTCCAGGCCACGCTCTCGGTCCTCATCAA CAAGGACGCTCCCGAGCACACTCAGCTGCGCGGTTTGGTGTCACGCATGTTCACCCCTCGTTCCATCGCCGCGCTGCGTA TCACATTGGAGGAACGTGCCGAACGTATCGTGCGGGCAGCCCTGGAAGGCGGGCACGGCGAGTTCGTGCGCGAGGTCGCC AGTGAGCTACCCATGCAGGCCATCGCCGAATTGATCGGTGTCCCCGAAGAAGACCGTGTCAAGCTCTTCGAGTGGAGCAA CCAGATGACCGGGTACGACGAGGCGGATGTGGAGATCGACCCGCGCGTCGGCGCCGCCCAGATACTCGGATATTCGTATC AGCTCGCCGAGCAGCGCCGCGATTGTCCGGGCAATGACGTGGTATCCCGGCTGCTCACCGGGACCGTGGACGGTGAGCAA CTCACCCCGGAACAGTTCGGGTTCTTTGTCGTGATGCTGTCGGTTGCCGGCAACGAAACCACCCGCAACGCAACCACCAT GGGCATGATGGCCTTCCTGGAACACCCCGGCCAATGGGAATTGTTCAAGTCCGCCCGCCCGAGTACTACGGTTGACGAGA TTGTCCGGTACACCTCGCCATTGATATCGCAACAGCGAACAGCACTGCAGGACACCGTGATCAGCGATGTACGCATCAGG GCGGGCGAACGCGTCGTCATGCTCTATCCGTCGGCCAACTTCGATGAAGAGGTGTTCGAGAACCCGCATACCTTCGACAT CACCCGCGATCCCAATCCGCATCTCGGCTTCGGCGGAACCGGCGCCCACTATTGCCTGGGGGCCAACCTCGCGAAGGCGG AACTGGAGATCATCTTCAACAAGATCGCCGACCGCATGCCGGACATCTCGCGGATCGGGGATGCGCCCCGGTTCCATTCC GGCTGGATCAACGGGATCAAGAAGTTCGACACGGCGTACTGCCCCGTCACGCACTGA
Upstream 100 bases:
>100_bases GCAAGCTCAGCGAGGGCATGCAGAAGCGCATCCAGCGCGGCCTGTCGGGCGAGAAGGTGCCCGGTTATTACCCCCTGGGC AAGACCCCGGTACCCCTCTG
Downstream 100 bases:
>100_bases TGCCCAATTGTGTTGTCGTTGGGGGTAGCCGGGGCATCGGCCGTGCGGTGGCGCTGCTACTCGGCGAGCTGGGCACCAAT GTGGTGGTGAACGGCCGTCA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTAMKTAAELGLPEGFDFTDPELYGNRMPHEEFATLRREAPVWWNPQPRTVGGFADEGYWVISKHRDVREVSLHTDTFSS GRKGAIPRLEDHISPEEFQATLSVLINKDAPEHTQLRGLVSRMFTPRSIAALRITLEERAERIVRAALEGGHGEFVREVA SELPMQAIAELIGVPEEDRVKLFEWSNQMTGYDEADVEIDPRVGAAQILGYSYQLAEQRRDCPGNDVVSRLLTGTVDGEQ LTPEQFGFFVVMLSVAGNETTRNATTMGMMAFLEHPGQWELFKSARPSTTVDEIVRYTSPLISQQRTALQDTVISDVRIR AGERVVMLYPSANFDEEVFENPHTFDITRDPNPHLGFGGTGAHYCLGANLAKAELEIIFNKIADRMPDISRIGDAPRFHS GWINGIKKFDTAYCPVTH
Sequences:
>Translated_418_residues MTAMKTAAELGLPEGFDFTDPELYGNRMPHEEFATLRREAPVWWNPQPRTVGGFADEGYWVISKHRDVREVSLHTDTFSS GRKGAIPRLEDHISPEEFQATLSVLINKDAPEHTQLRGLVSRMFTPRSIAALRITLEERAERIVRAALEGGHGEFVREVA SELPMQAIAELIGVPEEDRVKLFEWSNQMTGYDEADVEIDPRVGAAQILGYSYQLAEQRRDCPGNDVVSRLLTGTVDGEQ LTPEQFGFFVVMLSVAGNETTRNATTMGMMAFLEHPGQWELFKSARPSTTVDEIVRYTSPLISQQRTALQDTVISDVRIR AGERVVMLYPSANFDEEVFENPHTFDITRDPNPHLGFGGTGAHYCLGANLAKAELEIIFNKIADRMPDISRIGDAPRFHS GWINGIKKFDTAYCPVTH >Mature_417_residues TAMKTAAELGLPEGFDFTDPELYGNRMPHEEFATLRREAPVWWNPQPRTVGGFADEGYWVISKHRDVREVSLHTDTFSSG RKGAIPRLEDHISPEEFQATLSVLINKDAPEHTQLRGLVSRMFTPRSIAALRITLEERAERIVRAALEGGHGEFVREVAS ELPMQAIAELIGVPEEDRVKLFEWSNQMTGYDEADVEIDPRVGAAQILGYSYQLAEQRRDCPGNDVVSRLLTGTVDGEQL TPEQFGFFVVMLSVAGNETTRNATTMGMMAFLEHPGQWELFKSARPSTTVDEIVRYTSPLISQQRTALQDTVISDVRIRA GERVVMLYPSANFDEEVFENPHTFDITRDPNPHLGFGGTGAHYCLGANLAKAELEIIFNKIADRMPDISRIGDAPRFHSG WINGIKKFDTAYCPVTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46838; Mature: 46707
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMKTAAELGLPEGFDFTDPELYGNRMPHEEFATLRREAPVWWNPQPRTVGGFADEGYW CCCHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE VISKHRDVREVSLHTDTFSSGRKGAIPRLEDHISPEEFQATLSVLINKDAPEHTQLRGLV EEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH SRMFTPRSIAALRITLEERAERIVRAALEGGHGEFVREVASELPMQAIAELIGVPEEDRV HHHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHCE KLFEWSNQMTGYDEADVEIDPRVGAAQILGYSYQLAEQRRDCPGNDVVSRLLTGTVDGEQ EEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC LTPEQFGFFVVMLSVAGNETTRNATTMGMMAFLEHPGQWELFKSARPSTTVDEIVRYTSP CCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHH LISQQRTALQDTVISDVRIRAGERVVMLYPSANFDEEVFENPHTFDITRDPNPHLGFGGT HHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHCCCCEEEECCCCCCCCCCCCC GAHYCLGANLAKAELEIIFNKIADRMPDISRIGDAPRFHSGWINGIKKFDTAYCPVTH CCHHEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAMKTAAELGLPEGFDFTDPELYGNRMPHEEFATLRREAPVWWNPQPRTVGGFADEGYW CCHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE VISKHRDVREVSLHTDTFSSGRKGAIPRLEDHISPEEFQATLSVLINKDAPEHTQLRGLV EEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH SRMFTPRSIAALRITLEERAERIVRAALEGGHGEFVREVASELPMQAIAELIGVPEEDRV HHHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHCE KLFEWSNQMTGYDEADVEIDPRVGAAQILGYSYQLAEQRRDCPGNDVVSRLLTGTVDGEQ EEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC LTPEQFGFFVVMLSVAGNETTRNATTMGMMAFLEHPGQWELFKSARPSTTVDEIVRYTSP CCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHH LISQQRTALQDTVISDVRIRAGERVVMLYPSANFDEEVFENPHTFDITRDPNPHLGFGGT HHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHCCCCEEEECCCCCCCCCCCCC GAHYCLGANLAKAELEIIFNKIADRMPDISRIGDAPRFHSGWINGIKKFDTAYCPVTH CCHHEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]