| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mshB [H]
Identifier: 169628296
GI number: 169628296
Start: 1217397
End: 1218266
Strand: Direct
Name: mshB [H]
Synonym: MAB_1203
Alternate gene names: 169628296
Gene position: 1217397-1218266 (Clockwise)
Preceding gene: 169628293
Following gene: 169628297
Centisome position: 24.03
GC content: 65.75
Gene sequence:
>870_bases GTGACCGGATTGCGATTGATGGCGGTGCACGCCCACCCCGATGACGAGGCCAGTAAGGGCGCCGCCACCACGGCGCGGTA TGCCGCCGAGGGCAACGAGGTCATGGTGGTGACCCTCACCGGCGGTGAACGCGGCGACATCCTGAACCCGGCCATGGACC GTCCCGAGGTGGCCGCGAACATCGGTGCCATCCGCCGCGAGGAGATGGCCAAGGCCGCCGCCGAGCTCGGCGTGCGGCAC CGCTGGCTGGGTTACGTGGATTCGGGACTGCCGCAGGGCGACCCGCTGCCCCCGTTGCCGTCGGATTCGTTCGCCCTGGT GCCCATCGAGGAACCGATCGCCAAGCTGGTCGCGGTTGTCAGGGAGTTCCGCCCGCACGTCATGACGACCTACGACGAGA ACGGCGGCTATCCGCATCCGGATCACATCCGGTGCCACGAGGTCTCGATGGCGGCCTTCGAGGCCGCGGCGGACCCGGAG CAGTTTCCCGAGGCGGGTGAGCCGTGGACGGTCAGCAAGATCTATTACAACCACGGATTCATGCGAGCGCGTATGCAGTT GCTCAATGACGAGTGCAAGAAGCACGGGTACAAGGGTCCGTTCGACGAATGGCTTGAGCGTTGGCCGGCCGATGACGACA CCTTTGATCGCCGGGTGACCACGCGGGTGCCGTGCGCAGATTTCTTCGATGCCCGCGACGCGGCGCTGCGTGCGCATGCG TCGCAAATCCCGCCCGACAGCAGCTTTTTCGCGGTCCCACGCGAGTTCGAGCGGAAATTGTGGCCCACCGAGGACTTCGA GCTGGCGAAGTCACGCGTGCCGACGAGCACGCCCGAGGATGATCTGTTCGCAGGAGTTGAAACCAAATGA
Upstream 100 bases:
>100_bases ACGGGTCAACGGTATGCCGGGTATACCCGAGATGAAACGATGGGGGAGGTGAGTCCTCTCCCGAGGGCAGTGAACGGACC AGAAAGAGGCGGGCGCACGG
Downstream 100 bases:
>100_bases TGTTGATGGACGCCGTGCTGGTGCTCGCCGACGAGAAGAGTCCGACCAATATCGGACCGGACTTCGGTAAGGCCGGTCCC TTCGGTTTGACGGTGGTGGT
Product: LmbE-like protein
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAANIGAIRREEMAKAAAELGVRH RWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVVREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPE QFPEAGEPWTVSKIYYNHGFMRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK
Sequences:
>Translated_289_residues MTGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAANIGAIRREEMAKAAAELGVRH RWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVVREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPE QFPEAGEPWTVSKIYYNHGFMRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK >Mature_288_residues TGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAANIGAIRREEMAKAAAELGVRHR WLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVVREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPEQ FPEAGEPWTVSKIYYNHGFMRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHAS QIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 - InterPro: IPR017810 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: =3.5.1.103 [H]
Molecular weight: Translated: 32246; Mature: 32115
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAAN CCCCEEEEEECCCCCCHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH IGAIRREEMAKAAAELGVRHRWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH REFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPEQFPEAGEPWTVSKIYYNHGF HHHCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCH MRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK HCCCCCCCEEECCHHHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCCCC >Mature Secondary Structure TGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAAN CCCEEEEEECCCCCCHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH IGAIRREEMAKAAAELGVRHRWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH REFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPEQFPEAGEPWTVSKIYYNHGF HHHCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCH MRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK HCCCCCCCEEECCHHHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA