| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628293
Identifier: 169628293
GI number: 169628293
Start: 1215178
End: 1216086
Strand: Direct
Name: 169628293
Synonym: MAB_1200
Alternate gene names: NA
Gene position: 1215178-1216086 (Clockwise)
Preceding gene: 169628292
Following gene: 169628296
Centisome position: 23.98
GC content: 63.37
Gene sequence:
>909_bases ATGGGGGATATTCCATGGCCGTTCCGCTCGACCGAGATGCTGTCCACGGGCGCTGTGACGGAGCACTACATACGCACCCG CTACCGGCAGCTGTATCCGGGCATCTGCGTTCCGCGTGAGGTGGAGGTGAGCGCAACGCAGCGCGCGTACTCGGCGTGGT TATGGACCGGGCGACGTGGTGTGATCGCCGGGCTGGCGGCTTCGGCAGTGCATGGCGCCAAATGGGTCGAAGCCGGGGTA GTAGTCGACCTGATCCACCGTCACCATAAGACGGCCAGAGGCTTACGGATCCATCGAGACACGTTGATGGACAACGAGAT TGATCGCATCGAGGGGATTGCTGTCACGAGTCCGGCGCGCACCGCCTTCGATGTGGGTAGGTGGCTGCCGCAGGCTGGAG CCGTCGAGCGGATAGATGCTCTTATGGCTGCGACGGGCTTGGTAACTGAGCAGGTCGAGGACGTCATGAAGAAGCACAAA GGGGTGCGCGGCCTGGCTCGGCTGAGGAGCGTGTTGGCGCTGGTCGACGGAGGTTCCGAATCGCCGCAGGAGACCAGAAC TCGGCTGCTCTTAGTGAAATCGGGTTTTCCGCCGCCCCAGACGCAAATACGGGTGTTCAATCGCTACGGCGATTTCATCG CCCGTATCGACATGGGCTGGGAGGACTTGAAGGTCGGTGTCGAGTTCGATGGAGCTCAACACTGGTTGGACGCCCGCCAA CGATCGCACGACATCGATCGGGCCTCGGAGTTGGCGGCGCAGGGCTGGGCCATCGTGCGGGTGAGTGCCGAGATGCTGCG GCACCGCGCGGGCACGGTGGTCGCCCGTGTCGATGCGGCCCTCAGAAATGCCGCCCGGCCCACAACGAGTGCGAGCCTCA CGCGGATTTCAGGTCAGATTTCCGCGTGA
Upstream 100 bases:
>100_bases AGTGCGAGCCTGACGCGGAAATCTGCCCTGAAACCCGCGTGAGGCTCGCACTCGATCGGGGGCGGATGGGTTGTCGGTCG TCGGTGTGATGCTGACGGCC
Downstream 100 bases:
>100_bases GGCTCGCGCTCGATCGAAGGACTATGAAGGAATCACTCGTGGTACGGCTCGGCGCTGACCAGCGTCACCTGCACCTCGGT GCCGTTGGGCACCGTGTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGDIPWPFRSTEMLSTGAVTEHYIRTRYRQLYPGICVPREVEVSATQRAYSAWLWTGRRGVIAGLAASAVHGAKWVEAGV VVDLIHRHHKTARGLRIHRDTLMDNEIDRIEGIAVTSPARTAFDVGRWLPQAGAVERIDALMAATGLVTEQVEDVMKKHK GVRGLARLRSVLALVDGGSESPQETRTRLLLVKSGFPPPQTQIRVFNRYGDFIARIDMGWEDLKVGVEFDGAQHWLDARQ RSHDIDRASELAAQGWAIVRVSAEMLRHRAGTVVARVDAALRNAARPTTSASLTRISGQISA
Sequences:
>Translated_302_residues MGDIPWPFRSTEMLSTGAVTEHYIRTRYRQLYPGICVPREVEVSATQRAYSAWLWTGRRGVIAGLAASAVHGAKWVEAGV VVDLIHRHHKTARGLRIHRDTLMDNEIDRIEGIAVTSPARTAFDVGRWLPQAGAVERIDALMAATGLVTEQVEDVMKKHK GVRGLARLRSVLALVDGGSESPQETRTRLLLVKSGFPPPQTQIRVFNRYGDFIARIDMGWEDLKVGVEFDGAQHWLDARQ RSHDIDRASELAAQGWAIVRVSAEMLRHRAGTVVARVDAALRNAARPTTSASLTRISGQISA >Mature_301_residues GDIPWPFRSTEMLSTGAVTEHYIRTRYRQLYPGICVPREVEVSATQRAYSAWLWTGRRGVIAGLAASAVHGAKWVEAGVV VDLIHRHHKTARGLRIHRDTLMDNEIDRIEGIAVTSPARTAFDVGRWLPQAGAVERIDALMAATGLVTEQVEDVMKKHKG VRGLARLRSVLALVDGGSESPQETRTRLLLVKSGFPPPQTQIRVFNRYGDFIARIDMGWEDLKVGVEFDGAQHWLDARQR SHDIDRASELAAQGWAIVRVSAEMLRHRAGTVVARVDAALRNAARPTTSASLTRISGQISA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33410; Mature: 33278
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIPWPFRSTEMLSTGAVTEHYIRTRYRQLYPGICVPREVEVSATQRAYSAWLWTGRRG CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCH VIAGLAASAVHGAKWVEAGVVVDLIHRHHKTARGLRIHRDTLMDNEIDRIEGIAVTSPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHCCCCHHHHCCEEECCCCH TAFDVGRWLPQAGAVERIDALMAATGLVTEQVEDVMKKHKGVRGLARLRSVLALVDGGSE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC SPQETRTRLLLVKSGFPPPQTQIRVFNRYGDFIARIDMGWEDLKVGVEFDGAQHWLDARQ CHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECEEECCHHHHHHHHH RSHDIDRASELAAQGWAIVRVSAEMLRHRAGTVVARVDAALRNAARPTTSASLTRISGQI HHCCHHHHHHHHHCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHCCCC SA CC >Mature Secondary Structure GDIPWPFRSTEMLSTGAVTEHYIRTRYRQLYPGICVPREVEVSATQRAYSAWLWTGRRG CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCH VIAGLAASAVHGAKWVEAGVVVDLIHRHHKTARGLRIHRDTLMDNEIDRIEGIAVTSPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHCCCCHHHHCCEEECCCCH TAFDVGRWLPQAGAVERIDALMAATGLVTEQVEDVMKKHKGVRGLARLRSVLALVDGGSE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC SPQETRTRLLLVKSGFPPPQTQIRVFNRYGDFIARIDMGWEDLKVGVEFDGAQHWLDARQ CHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECEEECCHHHHHHHHH RSHDIDRASELAAQGWAIVRVSAEMLRHRAGTVVARVDAALRNAARPTTSASLTRISGQI HHCCHHHHHHHHHCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHCCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]